Query= MSMg01no277_l08.b1 MSMg01no277_l08.b1 CHROMAT_FILE:
MSMg01no277_l08.b1 PHD_FILE: MSMg01no277_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:54 2005
(310 letters)
>mm_chr15_67677597_67678306
Length = 710
Score = 495 bits (256), Expect = e-144
Identities = 289/306 (94%), Gaps = 10/306 (3%)
Strand = Plus / Minus
Query: 5 gaattcacagatgaccaaatctgtcttatagtctatgagcaatgaatactagaaaacagg 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaattcacagaggaacaaatctgtcttatagtctatgagcaatgaatactagaaaacagg 365
Query: 65 tctcaagagaccctagattcctggttagtgtcatttcaactgtgcctggcgaatctttca 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctcaagagataatagattcctggttagtgtcatttcaactgtgcctggcgaatctttca 305
Query: 125 catttccataactataatacaactcaaaggtgctcagtaattgcttcctaccccaacata 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 catttccataactataatacaactcaaaggtgctcagtaattgcttcctaccccaatata 245
Query: 185 tttgaataataagaacatccacccatcattttctagtggttattatgggtactggtatct 244
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 244 tttgaataataagaacatccacccatcattttctagt----------ggtactggtatct 195
Query: 245 ctataaggagagatatataaataagtctttatgcagagacccaggagggaagagtagttg 304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctataaggagagatatataaatacgtctttatgcagagacccaggagggaagagtagttg 135
Query: 305 gtggta 310
||||||
Sbjct: 134 gtggta 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_l08.g1 MSMg01no277_l08.g1 CHROMAT_FILE:
MSMg01no277_l08.g1 PHD_FILE: MSMg01no277_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:54 2005
(283 letters)
>mm_chr15_67524152_67524834
Length = 683
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%)
Strand = Plus / Plus
Query: 1 tctgacatgatttgaataactacaaatcatcacattgactgtctgcccattacttaacag 60
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 201 tctgacatgatttgaataactacaaatcatcacattgactgactgaacattacttaacag 260
Query: 61 gatttatttgaacaaaagaatctattaatcctatgaagtgttcccagccttttctatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttatttgaacaaaagaatctattaatcctatgaagtgttcccagccttttctatttc 320
Query: 121 ccttttcactacattgaaggactccttatatatactatgatatggttgatcattctctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttttcactacattgaaggactccttatatatactatgatatggttgatcattctctca 380
Query: 181 gcactaaatcctaaaagagtaagtctcagttcaaacctatttaatttttttattatctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcactaaatcctaaaagagtaagtctcagttcaaacctatttaatttttttattatctat 440
Query: 241 tgtctattagcactaaaaatgctagggaatatcttttctcc 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtctattagcactaaaaatgctagggaatatcttttctcc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
