Query= MSMg01no278_n08.b1 MSMg01no278_n08.b1 CHROMAT_FILE:
MSMg01no278_n08.b1 PHD_FILE: MSMg01no278_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:17 2005
(315 letters)
>mm_chr15_25521046_25521760
Length = 715
Score = 503 bits (260), Expect = e-147
Identities = 297/310 (95%), Gaps = 6/310 (1%)
Strand = Plus / Minus
Query: 9 gaattcatatatttatgggactgatggtaaaatattgttgaaattatgcttgcaaaggca 68
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 515 gaattcatataaatatgggactgatggtaaagcattgttgaaattatgcttgcaaaggca 456
Query: 69 aagcatt-attctccagcttggaccaagcaaagtatgtaactgtagaa--acactggggc 125
|| |||| ||| | ||||||||||||||||||||| |||||||||||| || |||||||
Sbjct: 455 aaacattaatt-t-cagcttggaccaagcaaagtacgtaactgtagaaagaccctggggc 398
Query: 126 tggtcctgacattccttttgttccataagattttcccctgctcttaaaataaaagaagga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tggtcctgacattccttttgttccataagattttcccctgctcttaaaataaaagaagga 338
Query: 186 atcatgctaagtatcctcgagtttgaagagtcattttagtttatatgatcttatttgcta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atcatgctaagtatcctcgagtttgaagagtcattttagtttatatgatcttatttgcta 278
Query: 246 ttccaatgagtaaatgagcctaggggtgtctatatattgctaacaacatttattggatgg 305
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 277 ttccaatgagtaaatgagcctaggggtgtctata-attgctaacaacatttattggatgg 219
Query: 306 cataggggtg 315
||||||||||
Sbjct: 218 cataggggtg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_n08.g1 MSMg01no278_n08.g1 CHROMAT_FILE:
MSMg01no278_n08.g1 PHD_FILE: MSMg01no278_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:17 2005
(285 letters)
>mm_chr15_25428156_25428843
Length = 688
Score = 493 bits (255), Expect = e-144
Identities = 277/287 (96%), Gaps = 7/287 (2%)
Strand = Plus / Plus
Query: 1 tggctaaggaggaaggttcagcaaaccaattaactaattaaaccaattaacaaaatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tggctaaggaggaaggttcagcaaaccaattaactaattaaaccaattaacgaaatgcat 260
Query: 61 aattaaccttgaaaacagcagtgtcaacaagcacaacaaagaagtggcccagggagttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattaaccttgaaaacagcagtgtcaacaagcacaacaaagaagtggcccagggagttgc 320
Query: 121 ctggtggttttaagccnttcctggnttttctgtcttaaagggatatacactgagggaaaa 180
|||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 321 ctggtggttttaagcc-ttcctgg-ttttctgtcttaaagggatatacacagagggaaaa 378
Query: 181 gaaagtgggtcaagcagcctcccattgagatgagagggaaccaa-----gccaagccaaa 235
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 gaaagtgggtcaagcagcctcccattgagatgagagggaaccaaaccaagccaagccaaa 438
Query: 236 cctttcaaagtccattataggcaactaagtatacagcagctttgacg 282
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 439 cctttcaaagtccattataggcaactaagtatatagcagctttgacg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 688
Length adjustment: 9
Effective length of query: 276
Effective length of database: 679
Effective search space: 187404
Effective search space used: 187404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
