Query= MSMg01no279_c18.b1 MSMg01no279_c18.b1 CHROMAT_FILE:
MSMg01no279_c18.b1 PHD_FILE: MSMg01no279_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(317 letters)
>mm_chr15_54876870_54877583
Length = 714
Score = 582 bits (301), Expect = e-171
Identities = 308/311 (99%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctccattttcagtttgacaataatgacatttttgtacatatctatttttatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctccattttcagtttgacaataatgacatttttgtacatatctatttttatg 264
Query: 65 tcaaacatgtttctttcaaaatcagtgtggtacaagatttcaaaagaactgttaccaaga 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaaacatgtttctttcaaa-tcagtgtggtacaagatttcaaaagaactgttaccaaga 323
Query: 125 aaaacttaaaagactctggtgagtttgaattcattcttggagcctttgtgcaaagtgcaa 184
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaacttaaaagact--ggtgagtttgaattcattcttggagcctttgtgcaaagtgcaa 381
Query: 185 gcaatcttttggcaatcttctgttctccttggaacctcacctttgcaagacagaagcacg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcaatcttttggcaatcttctgttctccttggaacctcacctttgcaagacagaagcacg 441
Query: 245 ctgacatcctgactcggtagaaacactgctcttgctctagtatatcagtgagcgcaaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgacatcctgactcggtagaaacactgctcttgctctagtatatcagtgagcgcaaggc 501
Query: 305 gcgatgccgga 315
|||||||||||
Sbjct: 502 gcgatgccgga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 714
Length adjustment: 9
Effective length of query: 308
Effective length of database: 705
Effective search space: 217140
Effective search space used: 217140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_c18.g1 MSMg01no279_c18.g1 CHROMAT_FILE:
MSMg01no279_c18.g1 PHD_FILE: MSMg01no279_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(357 letters)
>mm_chr15_55033954_55034711
Length = 758
Score = 603 bits (312), Expect = e-177
Identities = 347/360 (96%), Gaps = 5/360 (1%)
Strand = Plus / Minus
Query: 1 tcctggaaccccaacaggttcacttatttcaccaagataggcatggtaagtttcttaggt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 558 tcctggaaccccaacaggttcacttatttcaccaaggtaggcatggtaagtttcttaggt 499
Query: 61 ttctctgtttctggtctatttgagataaacagctatttctcttctgtctctccagggagg 120
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 498 ttctctgttcctggtctatttgagataaacagctatttctcttctgcctctccagggagg 439
Query: 121 tcttacaacagttcatcacaagtatttttcagaatgattcagaggtagaacatttgccta 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcttacaacagttcatcacaaggatttttcagaatgattcagaggtagaacatttgccta 379
Query: 181 gcattgacaaggcccctcactggacatgtgtagggtcctggtataatctctggccctaag 240
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 gcattgacaaggctcctcactggacatgtttagggtcctggtataatctctggccctaag 319
Query: 241 aaaagtttcaaaccaatgaaaatatataatgtcaatttatagccagatatgatagcagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaaagtttcaaaccaatgaaaatatataatgtcaatttatagccagatatgatagcag-- 261
Query: 301 attt--atagatcctagtacttggaagtggagatagcagaatttt-agcaagtttgaggc 357
|||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 260 atttcgatagatcctagtacttggaagtggagatggcagactttttagcaagtttgaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
