Query= MSMg01no279_k03.b1 MSMg01no279_k03.b1 CHROMAT_FILE:
MSMg01no279_k03.b1 PHD_FILE: MSMg01no279_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:16 2005
(716 letters)
>mm_chr15_50322053_50323168
Length = 1116
Score = 1367 bits (707), Expect = 0.0
Identities = 712/715 (99%), Gaps = 3/715 (0%)
Strand = Plus / Plus
Query: 5 gaattcctagtgattgtcaataaaatagtatttgctgtatcagagttaagtactgagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagtgattgtcaataaaatagtatttgctgtatcagagttaagtactgagaaa 264
Query: 65 tttcgacaaggtttttttgtattcttttgtttttgttttgttttggttttttgctcatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcgacaaggtttttttgtattcttttgtttttgttttgttttggttttttgctcatat 324
Query: 125 agaacgtgattatgatggactaaagccactctcaaacatccatatctttatttaatcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaacgtgattatgatggactaaagccactctcaaacatccatatctttatttaatcatt 384
Query: 185 tgaggaaaatctcattaataaataaagtacatatatttgatatatgaaaaaaaa---gaa 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 tgaggaaaatctcattaataaataaagtacatatatttgatatatgaaaaaaaaaaagaa 444
Query: 242 gcagttggggaggaaagggtttattcagcttacactttcacattgctgttcatcactgaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagttggggaggaaagggtttattcagcttacactttcacattgctgttcatcactgaa 504
Query: 302 ggaagtcatgactggaactcaggcaggtcaggaagcaggaactgatgcagaggccatgga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaagtcatgactggaactcaggcaggtcaggaagcaggaactgatgcagaggccatgga 564
Query: 362 gggatgttccttactgccttgctcagcttgctttcttatagaacccagactaccagccca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggatgttccttactgccttgctcagcttgctttcttatagaacccagactaccagccca 624
Query: 422 gagatggtcccacctacaaggggcctttcccacttgatcactaattgagaaaatgcctta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagatggtcccacctacaaggggcctttcccacttgatcactaattgagaaaatgcctta 684
Query: 482 cagttggatctcatggaggcatttcctcaactgaagctcctttctctgtgataactcaag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cagttggatctcatggaggcatttcctcaactgaagctcctttctctgtgataactcaag 744
Query: 542 ctgtgtcaagttgacacaaaactagccagtacaacatcaaaacaatcttctaagtatatg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgtgtcaagttgacacaaaactagccagtacaacatcaaaacaatcttctaagtatatg 804
Query: 602 atctggatggaatgcagacatgccctggattacacagtatgatctgactggaataaacac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atctggatggaatgcagacatgccctggattacacagtatgatctgactggaataaacac 864
Query: 662 atgcttttagtacacatctttaatccctaacaatgaaagaaaagttaatttgtag 716
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 atgcttttagtacacatctttaatccctaacaatgaaagaaaagttaatttgtag 919
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 716
Length of database: 1116
Length adjustment: 10
Effective length of query: 706
Effective length of database: 1106
Effective search space: 780836
Effective search space used: 780836
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no279_k03.g1 MSMg01no279_k03.g1 CHROMAT_FILE:
MSMg01no279_k03.g1 PHD_FILE: MSMg01no279_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:17 2005
(621 letters)
>mm_chr15_50441974_50442994
Length = 1021
Score = 1002 bits (518), Expect = 0.0
Identities = 518/518 (100%)
Strand = Plus / Minus
Query: 1 tggttccatctgaaccagacagtttagactgatgcctgtggaaaggatgtgggatcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tggttccatctgaaccagacagtttagactgatgcctgtggaaaggatgtgggatcactc 459
Query: 61 cagaattaatgtgaagtataggattttggcagtgggaaagccctctgaataccatcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cagaattaatgtgaagtataggattttggcagtgggaaagccctctgaataccatcagtt 399
Query: 121 tgagatatttttttgaaagtatctaaatgtgtttacacagctggatattccgttgaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgagatatttttttgaaagtatctaaatgtgtttacacagctggatattccgttgaagct 339
Query: 181 tcatctcttttcttcatgtttccagcttatttacaaatgtgtttctcgctgctttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tcatctcttttcttcatgtttccagcttatttacaaatgtgtttctcgctgctttttctt 279
Query: 241 cctttatgcaattcattttccaagtttgggttttaaaacctcagatagtaacaaaatgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cctttatgcaattcattttccaagtttgggttttaaaacctcagatagtaacaaaatgca 219
Query: 301 gtgaaacctgcttctgattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtgaaacctgcttctgattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactg 159
Query: 361 taccatcaatattatgagaaaatgaacaatccggaagttaaacattgaaaaatataatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taccatcaatattatgagaaaatgaacaatccggaagttaaacattgaaaaatataatct 99
Query: 421 aatcatagaaaaccaaaattaattctataaacacatatctaccaggatgattgacttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aatcatagaaaaccaaaattaattctataaacacatatctaccaggatgattgacttctt 39
Query: 481 ttttgaagctcagattagtgctgacaatatccagattt 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ttttgaagctcagattagtgctgacaatatccagattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
