Query= MSMg01no280_d22.b1 MSMg01no280_d22.b1 CHROMAT_FILE:
MSMg01no280_d22.b1 PHD_FILE: MSMg01no280_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:02 2005
(320 letters)
>mm_chr15_89365760_89366479
Length = 720
Score = 528 bits (273), Expect = e-154
Identities = 296/313 (94%), Gaps = 16/313 (5%)
Strand = Plus / Minus
Query: 4 ggaattcctatcaagtagatgctgaggtctccgtgtttgtcctcaggtcccctaactggt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggaattcctatcaagtagatgctgaggtctccgtgtttgtcctcaggtcccctaactggt 286
Query: 64 ccttcatggccatctcatcagcttcctaagctgattctgggtggtctcagcctgatctcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccttcatggccatctcatcagcttcctaagctgattctgggtggtctcagcctgatctcc 226
Query: 124 tcgctcactgctatggctttgctttttttttttttttttttttttttttagtaagtcctg 183
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 225 tcgctcactgctatggctttgc------------tttttttttttttttagtaagtcctg 178
Query: 184 gattctgtgtctccaagccacagactcttctgtgtgcagctttcttgtttgtttgtttgt 243
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 177 gattctgtgtctccaagccacagactcttctgtgtgcagctttc----ttgtttgtttgt 122
Query: 244 ttgtttgtttgtttgtttcaataagttaaggaccatcgcaagcttccttgctgctgttgt 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ttgtttgtttgtttgtttcaataagttaaggaccatcgcaaacttccttgctgctgttgt 62
Query: 304 tcgcactatcctg 316
|||||||||||||
Sbjct: 61 tcgcactatcctg 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_d22.g1 MSMg01no280_d22.g1 CHROMAT_FILE:
MSMg01no280_d22.g1 PHD_FILE: MSMg01no280_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:02 2005
(335 letters)
>mm_chr15_89308110_89308844
Length = 735
Score = 648 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 1 actgtgaattgtaatttgaaaggaatcaaccagaagcactttctttccgttgctagctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgaattgtaatttgaaaggaatcaaccagaagcactttctttccgttgctagctgg 260
Query: 61 ggaactaccccaggacctgcgcattattctctggagagcccgagtggggttgcgatgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaactaccccaggacctgcgcattattctctggagagcccgagtggggttgcgatgtta 320
Query: 121 tgcaaatcgaggtacgtttcccctgggttcttgggggactcaggtgtgtgtacacgtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaaatcgaggtacgtttcccctgggttcttgggggactcaggtgtgtgtacacgtgaa 380
Query: 181 ggttgcttgggctcagctctgacctagagctgtggaaaacttggaaagaggtatctgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttgcttgggctcagctctgacctagagctgtggaaaacttggaaagaggtatctgcct 440
Query: 241 gccgccagctctgttcaaagctgagcactgaaggccaacctgtctttagagatgtgaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccgccagctctgttcaaagctgagcactgaaggccaacctgtctttagagatgtgaact 500
Query: 301 ctctcccacccccacccccccttttttttcccaca 335
|||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctcccacccccacccccccttttttttcccaca 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
