Query= MSMg01no280_j07.b1 MSMg01no280_j07.b1 CHROMAT_FILE:
MSMg01no280_j07.b1 PHD_FILE: MSMg01no280_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:27 2005
(649 letters)
>mm_chr15_81152055_81153103
Length = 1049
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 1 cctcaaactcctagagatccacctgcctctgcctcccgagtactaggattaaacgtcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 461 cctcaaactcctagagatccacctgcctctgcctcccgagtactaggattaaa-gtcctg 403
Query: 61 tgccaccactgcctggccattgctttaatttttatttgccacatctggctagtggttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgccaccactgcctggccattgctttaatttttatttgccacatctggctagtggttact 343
Query: 121 gtcgttgataatgaaataacataccaagcctctccaattgtatgtgatcaagaaacaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtcgttgataatgaaataacataccaagcctctccaattgtatgtgatcaagaaacaact 283
Query: 181 gaagaggggctggagagatggctcaggggctaagaatattggctgctctttcagaggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaagaggggctggagagatggctcaggggctaagaatattggctgctctttcagaggact 223
Query: 241 tgggttcagttctggtacccacatggcactttgtaattttgaaagtgttgatttttcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgggttcagttctggtacccacatggcactttgtaattttgaaagtgttgatttttcctt 163
Query: 301 atcctggctagcttctaaataaatgagacagagactttgcaatgtatttaatcaagcttt 360
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 162 atcctggctagcttctaaataaatgagacagagactttacaatttatttaatcaagcttt 103
Query: 361 acagcacagtagctgagcagttgttaatctgtgttaatcctctaaacgaatctgacgacc 420
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
Sbjct: 102 acagcacagtagctgagcagttgttaatctgttttaatcctctaaacgaatttgacgatc 43
Query: 421 tctcaaccaaaatcccaagatgcttgcatttgagcattgctc 462
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 42 tctcaaccaaaatcccaagatacttgcatttgagcattgctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_j07.g1 MSMg01no280_j07.g1 CHROMAT_FILE:
MSMg01no280_j07.g1 PHD_FILE: MSMg01no280_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:27 2005
(295 letters)
>mm_chr15_81006217_81006911
Length = 695
Score = 410 bits (212), Expect = e-119
Identities = 227/232 (97%)
Strand = Plus / Plus
Query: 1 ctgagatatacacaagagacccacaaagtgtctaagaatgctttatgagtacacatactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 102 ctgagatatacacaagagacccacaaagtgtctaagaatgctttatgagtagaaatactg 161
Query: 61 cacactttggcttaaaggacaaagtgaaatagagatcaatcatgtcgggactccatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cacactttggcttaaaggacaaagtgaaatagagatcaatcatgtcgggactccatggct 221
Query: 121 gcaccccagctctcacatcaggactccatggctgcaccccagcactcatgtcaggactcc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gcaccccagctctcacgtcaggactccatggctgcaccccagcactcatgtcaggactcc 281
Query: 181 atggctgcaccccagcactcatgtcaggactccatggctgcaccccagcact 232
|||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 282 atggctgcaccccacccctcatgtcaggactccatggctgcaccccagcact 333
Score = 217 bits (112), Expect = 8e-61
Identities = 159/196 (81%), Gaps = 33/196 (16%)
Strand = Plus / Plus
Query: 100 tcatgtcgggactccatggctgcaccccagctctcacatcaggactccatggctgcaccc 159
||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 333 tcatgtcaggactccatggctgcaccccagcactcatgtcaggactccatggctgcaccc 392
Query: 160 cagcactcatgtcaggactccatggctgcaccccagcactcatgtcaggactccatggct 219
||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cagcactcatgtcaggactccatggctgcaccccagcact-------------------- 432
Query: 220 gcaccccagcactggtggctatcagaattctacatggaagaatcaggccaacggaactac 279
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 -------------ggtggctatcagaattctacatggaagaatcaggccaacggaactac 479
Query: 280 tcagaacactgacagg 295
||||||||||||||||
Sbjct: 480 tcagaacactgacagg 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 3
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
