Query= MSMg01no288_j09.b1 MSMg01no288_j09.b1 CHROMAT_FILE:
MSMg01no288_j09.b1 PHD_FILE: MSMg01no288_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:42 2005
(233 letters)
>mm_chr15_36419356_36419988
Length = 633
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%)
Strand = Plus / Minus
Query: 1 acgacaggattgctttcagaacgctgtgccggctgcttcctgtggagcagtgaccctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acgacaggattgctttcagaacgctgtgccggctgcttcctgtggagcagtgaccctgca 374
Query: 61 gagctggattgttcttgggatgagggagtccatttggaatgtgaacacgtgtgtctgtcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 373 gagctggattgttcttgggatgagggagtccatttggaatgtgaacacgtgtgtctatcc 314
Query: 121 cctggcctgaggtctgtggtgtgtgtccacttgggttatgagcagtcgccgctccctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cctggcctgaggtctgtggtgtgtgtccacttgggttatgagcagtcgccgctccctggg 254
Query: 181 agatctaggagtgctctcgggcatgggtggttgctttctaactggaagccact 233
|||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 253 agatctaggagtgcgcacgggcatgggtggttgctttctaactggaagccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_j09.g1 MSMg01no288_j09.g1 CHROMAT_FILE:
MSMg01no288_j09.g1 PHD_FILE: MSMg01no288_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:42 2005
(234 letters)
>mm_chr15_36240212_36240847
Length = 636
Score = 431 bits (223), Expect = e-125
Identities = 230/233 (98%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 1 agtctcttcctggtagctgaactgttcgctccatcctccgtggcattcatgaccaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctcttcctggtagctgaactgttcgctccatcctccgtggcattcatgaccaccttc 260
Query: 61 attctggaggtattgctctagctgatgtttggcttctcacaggcttttgtgcaggctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctggaggtattgctctagctgatgtttggcttctcacaggcttttgtgcaggctact 320
Query: 121 cctggcattcaccagcttctagtatctaacagggtcctaattcttagtct--tttttttt 178
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 cctggcattcaccagcttctagtatctaacagggtcctaattcttagtctcttttttttt 380
Query: 179 ccttttcttttcttctatgttttccccttggaggtgataacctacccattttt 231
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttttcttttctactatgttttccccttggaggtgataacctacccattttt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
