Query= MSMg01no291_f04.b1 MSMg01no291_f04.b1 CHROMAT_FILE:
MSMg01no291_f04.b1 PHD_FILE: MSMg01no291_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:05 2005
(229 letters)
>mm_chr15_72339569_72340197
Length = 629
Score = 435 bits (225), Expect = e-127
Identities = 228/229 (99%)
Strand = Plus / Minus
Query: 1 acgtctttggctaattattgccagttcagctttggagggaagggcaccaaattgtctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acgtctttggctaattattgccagttcagctttggagggaagggcaccaaattgtctctt 370
Query: 61 ccaagctcaacgtaagagcaccaagggaaggaatgagtcttggcttatgtccctataagt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccaagctcaacataagagcaccaagggaaggaatgagtcttggcttatgtccctataagt 310
Query: 121 ggatcttctccaatggttgatttgttccttagcgtaggacctggtgatattgttctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggatcttctccaatggttgatttgttccttagcgtaggacctggtgatattgttctctgg 250
Query: 181 gcacatccactgatgtgctctcttggggtgagagcagggaggagtcaaa 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcacatccactgatgtgctctcttggggtgagagcagggaggagtcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_f04.g1 MSMg01no291_f04.g1 CHROMAT_FILE:
MSMg01no291_f04.g1 PHD_FILE: MSMg01no291_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:05 2005
(290 letters)
>mm_chr15_72190064_72190753
Length = 690
Score = 476 bits (246), Expect = e-139
Identities = 281/298 (94%), Gaps = 12/298 (4%)
Strand = Plus / Plus
Query: 1 acatatgtgtcccgagctggcttcccagcatccagaagaacacctggcatctggcaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatatgtgtcccgagctggcttcccagcatccagaagaacacctggcatctggcaccat 260
Query: 61 ccaagagcatccactaaatcagtgaataaaggaaataaaagagaaagaatgctttctaaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 261 ccaagagcatccgctaaatcagtgaataaaggaaataaaagagaaagaacgctctctaaa 320
Query: 121 gctgtgggtgtttttaatgtgtgcacatgtgtgtgcagatgcacctaaatgtgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgtgggtgtttttaatgtgtgcacatgtgtgtgcagatgcacctaaatgtgtgtgtgt 380
Query: 181 gtgtgtgtgtgtgtgtgtgtgtgtgtg---------ga-tgctcacgtgcatgcatacga 230
||||||||||||||||||||||||||| || ||||| ||||||||||| |||
Sbjct: 381 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatgctcgcgtgcatgcatgcga 440
Query: 231 aggccacaggtcaaccttaggtatcatgcctcaggtatgatctactgtgct-ttatga 287
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 441 aggccacaggtcaaccttaggtatcatgcctcaggtatgatctactgtg-tattatga 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
