Query= MSMg01no291_g14.b1 MSMg01no291_g14.b1 CHROMAT_FILE:
MSMg01no291_g14.b1 PHD_FILE: MSMg01no291_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:11 2005
(315 letters)
>mm_chr15_41804671_41805377
Length = 707
Score = 495 bits (256), Expect = e-144
Identities = 295/312 (94%), Gaps = 10/312 (3%)
Strand = Plus / Plus
Query: 5 gaattcactaaaaatatattaaagtacacttaagagctaggaaatgctgaccctcagaaa 64
|||||||||||||||||||||| ||||||||| |||||||||||||||||| |||
Sbjct: 205 gaattcactaaaaatatattaaggtacactta------aggaaatgctgaccctca-aaa 257
Query: 65 -ccagtataacctttggcacacagaaacagagatgtgttgcttcatcgaataaagggagc 123
||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 258 tccagtattacctttggcacgcggaaacagagatgtgttgcttcattaaataaagggagc 317
Query: 124 ggctgtgaaaggcagaccaagtccccgcctgccaccgtgcggacactgttagaactgcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggctgtgaaaggcagaccaagtccccgcctgccaccgtgcggacactgttagaactgcac 377
Query: 184 ctcattctccgtgatgccaagcagagcaaacactggagttacttttaagtggacggaatt 243
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 378 ctcattctccgtgatgccaagcagagcaaacactggagttactt--aagtggacggaatt 435
Query: 244 gaggcaaatgcccagatgatctagatgagaaaggagttttcacttgaaatattaccatta 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gagacaaatgcccagatgatctagatgagaaaggagttttcacttgaaatattaccatta 495
Query: 304 ttgaaacaattg 315
||||||||||||
Sbjct: 496 ttgaaacaattg 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 707
Length adjustment: 9
Effective length of query: 306
Effective length of database: 698
Effective search space: 213588
Effective search space used: 213588
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_g14.g1 MSMg01no291_g14.g1 CHROMAT_FILE:
MSMg01no291_g14.g1 PHD_FILE: MSMg01no291_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:11 2005
(283 letters)
>mm_chr15_41983028_41983710
Length = 683
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Minus
Query: 1 cttaggttcaattcctatcccatacagcaccccccaatcatatgtacgtctagttcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cttaggttcaattcctatcccatacagcaccccccaatcatatgtacgtctagttcctgg 314
Query: 61 gaatctgaaatccaactctaactgcctttggctcttgcacacacctggtgtacatatata 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 313 gaatctgaaatccaactctaactgcctttggctcttgcacacacctgatgtacatatata 254
Query: 121 cagtcagataaacacattgcataataaatgaatattgatagattaatttgggaggaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagtcagataaacacattgcataataaatgaatattgatagattaatttgggaggaattt 194
Query: 181 aaatatgataagagagaatacttcaactaaacaccatatactatcaaataacacccccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaatatgataagagagaatacttcaactaaacaccatatactatcaaataacacccccca 134
Query: 241 gtatcaggaatggtttacatctttttagttgtcccatag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtatcaggaatggtttacatctttttagttgtcccatag 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
