Query= MSMg01no293_e07.b1 MSMg01no293_e07.b1 CHROMAT_FILE:
MSMg01no293_e07.b1 PHD_FILE: MSMg01no293_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:37 2005
(294 letters)
>mm_chr15_102824338_102825032
Length = 695
Score = 495 bits (256), Expect = e-144
Identities = 283/294 (96%), Gaps = 7/294 (2%)
Strand = Plus / Plus
Query: 1 gctcgaaaggaaaaaaaa-cgttaaaatatatctataataataattttg-t--ttccctg 56
|||||||||||||||||| |||||||||||||||||||||||||||||| | || ||
Sbjct: 201 gctcgaaaggaaaaaaaaacgttaaaatatatctataataataattttggtcatt---tg 257
Query: 57 tctttatgtccagctatgaatgtagattttgtgtcctgaaagctctgttcctggtccaag 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tctttatgtccagctatgaatgtagattttgtgtcctgaaagctctgttcctggtccaag 317
Query: 117 tactttgtattgtatacgtgagtcataataaaaaaaaaagaattaaaaagtagagctgga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tactttgtattgtatacgtgagtcataataaaaaaaaaagaattaaaaagtagagctgga 377
Query: 177 atgacttgctgtttctctataactcttccccattttctactcctccctctctttattccc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgacttgctgtttctctataactcttccccattttctactcctccctctctttattccc 437
Query: 237 tttcccagctctgctttaggccccacactgatcttgctttgggtggtggaactt 290
|||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 438 tttcccagctctgcaaaaggccccgcactgatcttgctttgggtggtggaactt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 695
Length adjustment: 9
Effective length of query: 285
Effective length of database: 686
Effective search space: 195510
Effective search space used: 195510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no293_e07.g1 MSMg01no293_e07.g1 CHROMAT_FILE:
MSMg01no293_e07.g1 PHD_FILE: MSMg01no293_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:37 2005
(246 letters)
>mm_chr15_102982476_102983121
Length = 646
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Minus
Query: 1 aatagtggagtgagggtaggtgtgggaattgaggggattagcatgtaccgagaatatgca 60
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 372 aatagtggagtgagggtaggtgtgggaatcgaggggattagcatgtagtgagaatatgca 313
Query: 61 ggaaggctggtagagaccatggtgcccaaggcacctatgctctgactgtagtggattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggaaggctggtagagaccatggtgcccaaggcacctatgctctgactgtagtggattttt 253
Query: 121 accctcaattcctccaatgtgacttgtcagagactggttagagttccatgcctgctaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 accctcaattcctccaatgtgacttgtcagagactggttagagttccatgcctgctaggg 193
Query: 181 ttgccataacaaaaatacccagtctgatggcttgaacaatggactttattttttcataat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 192 ttgccataacaaaaatacccagtctgatggcttgaacaatggactttattttctcataat 133
Query: 241 tctgg 245
|||||
Sbjct: 132 tctgg 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
