Query= MSMg01no293_n18.b1 MSMg01no293_n18.b1 CHROMAT_FILE:
MSMg01no293_n18.b1 PHD_FILE: MSMg01no293_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:24 2005
(698 letters)
>mm_chr15_35690916_35692013
Length = 1098
Score = 1290 bits (667), Expect = 0.0
Identities = 688/695 (98%), Gaps = 2/695 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaattctgattaactcagaaaaatgaaatgtataccagaaatgtagtaattttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 gaattcaaattctgattaactcagaaaaatgaaatgtataccagaaatgtagtaattttg 839
Query: 65 gcaatattcaactatatatgcatctgagctgcattattgaccttattttactgaatgctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gcaatattcaactatatatgcatctgagctgcattattgaccttattttactgaatgctc 779
Query: 125 ttgaatgctcggaaatgaaaatcatttccttgagcagatgaaaggatggactacggtatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 778 ttgaatgctcggaaatgaaaatcatttccttgagcagatgaaaggatggactatggtatt 719
Query: 185 tattaaaaaaaaaatggtacaaaagtgagaaggcaagtacagcttcctttcttatgcctt 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tattaaaaaaaaaatagtacaaaagtgagaaggcaagtacagcttcctttcttatgcctt 659
Query: 245 gtaagatgcgccaggagcttagcactgcatacagggtcagctgagtcttaacaccgggca 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 658 gtaagatgcgccaggagcttagcactgcatacagggtcagctgagccttaacaccgggca 599
Query: 305 gaagccgggccctccgagcagggtcacgggtatgcttccttacacgggcctctcttaagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaagccgggccctccgagcagggtcacgggtatgcttccttacacgggcctctcttaagg 539
Query: 365 ccccagtgaca-ccagacgcacagattcctcagaatatgaaaataatttcaggtttgctt 423
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ccccagtga-agtcagacgcacagattcctcagaatatgaaaataatttcaggtttgctt 480
Query: 424 ctgtttctcagccatcacttgtgtatcctgagtgtgaagtgtggtttaatgctgatttct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctgtttctcagccatcacttgtgtatcctgagtgtgaagtgtggtttaatgctgatttct 420
Query: 484 gagtgactgcccctcagcaatgtgtgacgactgcaagagctcgctggccctaaagcactg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gagtgactgcccctcagcaatgtgtgacgactgcaagagctcgctggccctaaagcactg 360
Query: 544 gtttcgttcctgcggagttatgtccaagctgttctgtatgtgtcagaccttgaatctcca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtttcgttcctgcggagttatgtccaagctgttctgtatgtgtcagaccttgaatctcca 300
Query: 604 gatgatgacaaatttggcgtcacaagtaaaccctcctagtactgaatacaaccgatcaaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gatgatgacaaatttggcgtcacaagtaaaccctcctagtactgaatacaaccgatcaaa 240
Query: 664 gcttttagggagcctgaaatttcaaagatctagac 698
| |||||||||||||||||||||||||||||||||
Sbjct: 239 gtttttagggagcctgaaatttcaaagatctagac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_n18.g1 MSMg01no293_n18.g1 CHROMAT_FILE:
MSMg01no293_n18.g1 PHD_FILE: MSMg01no293_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:24 2005
(694 letters)
>mm_chr15_35532422_35533516
Length = 1095
Score = 1266 bits (655), Expect = 0.0
Identities = 685/695 (98%), Gaps = 1/695 (0%)
Strand = Plus / Plus
Query: 1 cctgaaattatgaagtaattcatacatttatttatttgtttcaattctagagagtcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgaaattatgaagtaattcatacatttatttatttgtttcaattctagagagtcttaa 260
Query: 61 ataccaatgaagctctctaacatagtgctttgtcagtctttgttgtaatcttttcgtggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataccaatgaagctctctaacatagtgctttgtcagtctttgttgtaatcttttcgtggc 320
Query: 121 aggcctatttcttttgtctctatgtttcttgagtttcagttcagatctttgtagatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcctatttcttttgtctctatgtttcttgagtttcagttcagatctttgtagatgtga 380
Query: 181 aagagtgcacagatttaaataaagaagggtgtagcttacaatgacaggctttttttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagtgcacagatttaaataaagaagggtgtagcttacaatgacaggctttttttctcc 440
Query: 241 ctttaatttgaaaatttttaagagaaattatttacttctttatttatttaagcacactgt 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ctttaatttgaaaatttttaagagaatttatttacttctttatttatttaagcacactgt 500
Query: 301 agctgtcttcagacacacctgaagagcgcccattgcagatggccgcgagccatcatgtgg 360
|||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 501 agctgtcttcagacacacctgaagagcgcccattgcagatggttgtgagtcatcatgtgg 560
Query: 361 ttactgggaattgaacccagaaactctggaagagcagtcagggcttttaactgctaagcc 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttactgggaattgaacccaggaactctggaagagcagtcagggcttttaactgctaagcc 620
Query: 421 atctctccatccctgaaattgtttcttaaagaataaagtatattcacatagagaatatct 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctctcaatccctgaaattgtttcttaaagaataaagtatattcacatagagaatatct 680
Query: 481 cattctctagtggttttattccatttattcctaaggttttatatcaaatgaggggaacat 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 cattctctagtggttttattccatttattcctgaggttttatatcaaatgaggggaacat 740
Query: 541 attttg-ggggggggctatgaggcagttgtctttgtaaaagcacctagaacagcattaga 599
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atttggcggggggggctatgaggcagttgtctttgtaaaagcacctagaacagcattaga 800
Query: 600 aaaaatttacgaatgaagtatttcatgagatagcaggtgatttttttagattaatgtata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaaatttacgaatgaagtatttcatgagatagcaggtgatttttttagattaatgtata 860
Query: 660 aagacttctttttagatgagttgccatcacaaaaa 694
|||||||||||||||||||||||||||||||||||
Sbjct: 861 aagacttctttttagatgagttgccatcacaaaaa 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1095
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1085
Effective search space: 742140
Effective search space used: 742140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
