TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTAACACAGTCCTGTAAAGCCACCCATAGTTGTTTGCTTGTTTGG
TTTCTTTTAATTGTTTGGTTCCTTAAATTTTTTTTGAAGATTTATTTATT
TCATTTATGAGTACACTGTAGCTCTCTTCAGACACACCAGAAAAGGGCAC
CCGGATCCCATTACAGATGGTTGTGAGCTACCATGTGGCTGCTGGGAATT
GAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTATTAACCGCTGAGCCAT
CTCTCCAGCCCTCCCTTGTTTGTTTTCTTTCTGCATGCCAGTCAGTGTTC
AGAACAGTCTGTATATTTGCCCTCACTTCCAGACCTTCAGTCTTCAGAGC
CACATTGCTTTGTGCCCCGAAGAACCAAACCTGAAAGCTAAAGATTCTGT
CTCATGTAACTAACAGTTTGAAAGCCTCAGTGTGAGCTTTGTCTTTTGTG
CTCCCAAATGATTGCTGGCTGTCCTTAAACAAGGGCCATTTACCACCACT
GGGTCACATGTATCACCTGCATTGGGCTTCTTTCCAGGAAGGGAAAATGT
AGGTTTGGTAGTTATTTATTTATTTATTTATTTTTGAGACAGAGTTTCTC
TTTTGGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTT

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAAGCCTGTCTTTAGAAAAAA
AAAGTTCTCTCTCTGCTGCCTGTTGATCCAGATGTAGAGCTCTGAGCTCC
TTCTCCAGCACTATGTCTGCCGGCATGTCACCATGCTTCCCACCAGGATG
ACAATGGACTAAACTTCTGAACCTGTAAGCCAGCCCCAACTACATGTTTT
CCTTTGTAAGAAACAGAAAGAAATAAGTCCTAAGAAGTGACTAATCATCA
ACCTACTCTAATATATAAAATAAGAATAAATTTACTGTACAAACAAGGAG
TCTTTTTAAGATCTTTCTCTAATAATCAGAACCATATCAGCACACATAGA
GACGACACCCTAATGGGTCTACCACCACCCCTCAACCCTGAGAAAATGTT
TTCAAAAAACAGAGTCTCACAAGTAGCCCTGGCTGGCACAGAACTCTCTA
CATGGACCATACTGGTATCAAACTTACAGAGCTCTGCCCATCTTTACCTC
CCAAGTGCTGCAATTAAAGGCATACATCACTATATCTGGCCTGATCTGGG
TGTTTTTAAAGCAAGGCTTACAAGACACCGTCTCCCTAGTTACTTTAATT
TAGTATGTGTGGTGGTTTGAATAAAATGACCCCCATAGGCCCATTAGGGA
GTGGGAATCTTAGGAGGTGTCACTTTGTTGGAGTAGATATGACCTTGTTG
N

Query= MSMg01no296_m24.b1 MSMg01no296_m24.b1 CHROMAT_FILE:
MSMg01no296_m24.b1 PHD_FILE: MSMg01no296_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:06 2005
         (685 letters)



>mm_chr15_55041891_55042975
          Length = 1085

 Score = 1118 bits (578), Expect = 0.0
 Identities = 640/670 (95%), Gaps = 17/670 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtaacacagtcctgtaaagccacccatagttgtttgcttgtttggtttctttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtaacacagtcctgtaaagccacccatagttgtttgcttgtttggtttctttt 264

                                                                       
Query: 65  aattgtttggttccttaaattttttttgaagatttatttatttcatttatgagtacactg 124
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattgtttggttttttaaattttttttgaagatttatttatttcatttatgagtacactg 324

                                                                       
Query: 125 tagctctcttcagacacaccagaaaagggcacccggatcccattacagatggttgtgagc 184
           ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 tagctgtcttcagacacaccagaagagggcacccggatcccattacagatggttgtgagc 384

                                                                       
Query: 185 taccatgtggctgctgggaattgaactcaggacctctggaagagcagtcagtgctattaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 taccatgtggctgctgggaattgaactcaggacctctggaagagcagtcagtgctcttaa 444

                                                                       
Query: 245 ccgctgagccatctctccagccctcccttgtttgttttctttctgcatgccagtcagtgt 304
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 ccgctgagccatctctccagccctcccttgtttgttttctttctgcgtgccagtcagtgt 504

                                                                       
Query: 305 tcagaacagtctgtatatttgccctcacttccagaccttcagtcttcagagccacattgc 364
           ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 tcagaacagcctatatatttgccctcacttccagaccttcagtcttcagagccacactgc 564

                                                                       
Query: 365 tttgtgccccgaagaaccaaacctgaaagctaaagattctgtctcatgtaactaacagtt 424
           |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgtggcaggaagaaccaaacctgaaagctaaagattctgtctcatgtaactaacagtt 624

                                                                       
Query: 425 tgaaagcctcagtgtgagctttgtcttttgtgctcccaaatgattgctggctgtccttaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaaagcctcagtgtgagctttgtcttttgtgctcccaaatgattgctggctgtccttaa 684

                                                                       
Query: 485 acaagggccatttaccaccactg-g--------gtcacatgtatcacctgcattgggctt 535
           ||||||||||||||||||||||| |        |||||||||||||||||||||||||||
Sbjct: 685 acaagggccatttaccaccactgtgtactaagtgtcacatgtatcacctgcattgggctt 744

                                                                       
Query: 536 ctttccaggaagggaaaatgtaggtttggtagttatttatttatttatttattt------ 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 745 ctttccaggaagggaaaatgtaggtttggtagttatttatttatttatttatttatttat 804

                                                                       
Query: 590 --ttgagacagagtttctcttttgggctttctttctttctttctttctttctttctttct 647
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttgagacagagtttctcttttggtctttctttctttctttctttctttctttctttct 864

                     
Query: 648 ttctttcttt 657
           ||||||||||
Sbjct: 865 ttctttcttt 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 123
Number of extensions: 39
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)