Query= MSMg01no298_h03.b1 MSMg01no298_h03.b1 CHROMAT_FILE:
MSMg01no298_h03.b1 PHD_FILE: MSMg01no298_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:08 2005
(223 letters)
>mm_chr15_28555792_28556414
Length = 623
Score = 412 bits (213), Expect = e-120
Identities = 219/221 (99%)
Strand = Plus / Plus
Query: 1 acacacacacacacacacacacacacacacacacacacacacacacacgagatggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacacacacacacacacacacacacacacacacacacacacacacacgagatggagata 260
Query: 61 gctaagaaagatacaaacctaggtattacataatgtctgttcaaggtctacaattgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaagaaagatacaaacctaggtattacataatgtctgttcaaggtctacaattgagtt 320
Query: 121 ttttgcccttcatttcctgatcattatgtatgtgaagctaggaaatgtcaagaaaaccct 180
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ttttgccctccatttcctgatcattatgtatgtgaagctaggaaatgtcaataaaaccct 380
Query: 181 aaccaaaaggaatagatgcgtttgttatgtaaattgaattg 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccaaaaggaatagatgcgtttgttatgtaaattgaattg 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no298_h03.g1 MSMg01no298_h03.g1 CHROMAT_FILE:
MSMg01no298_h03.g1 PHD_FILE: MSMg01no298_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:08 2005
(234 letters)
>mm_chr15_28699840_28700473
Length = 634
Score = 385 bits (199), Expect = e-111
Identities = 225/239 (94%), Gaps = 10/239 (4%)
Strand = Plus / Minus
Query: 1 atcactgtgcactgcatcttctgtgctgttctctttttccatga-----ccccctaataa 55
||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 434 atcactgtgcactgcatcttctgcgctgttctctttttccatgagaaat-----taataa 380
Query: 56 atgagtagatattcaaaagcatagtaatctgacccacgtgtgctcactcacatgaggaca 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 atgagtagatattcaaaagcatagtaatctgacccacgtgtgctcactcacatgagggca 320
Query: 116 catatgcaagagaaccaatactgtaaccaatgttggatggagagattatccaggataaat 175
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 319 catatgcaagagaaccaatactgtaaccaatgttggatggagagattattcaggataaat 260
Query: 176 tttaaccatatgtttaaaaaaaaaaacaagggaaaatgatattgatcggtgaagccagg 234
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 259 tttaaccatatgtttaaaaaaaaaaacaagggaaaatgatattgatcggtgacgccagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
