CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTGTCTCACTCTCTCTACGTTTTTCTTCTTTATGGCTATCTAT
AGACCAAAAATGGGAGATAAAGGTGAAACTTAGATAATATAACTGAATTC
TCCAAATTAAATGTCATATATACAAGCATGTTTAGAAATGTTCACATGAG
AAGAAAGGACAAGGAAATACAGGAGGCAATCATGGAGGTCACGGAAAGTT
TCCTTTCTCTTGTTTTCAAATGCAACAGATTTTAAGCTAATGATTAAAAA
TGCATTATGAGAAGACATTGGCAAGATCATTAGAAAAGAACATGAAATAT
GACCATCTCAAGTAATAAATTAAGAACATAATTAAATAACTGACTACTCA
CTTCCTCAACCTTTAAGCCAAATGCTATAATCTGGGATTTAAAATTAATA
AGGAAACCATAGAAACAGATACTGAGGAAAACTTCCAAAGAAACCTTGCT
TCATTTCACTGTAATCTTAAAAAGTAGATATTTGAGTGGGCAGTGAATCA
GAGAAGTACTCTGAAACATGACTTTAATTTATTACCAACCAGAATTAAAT
AAGGTCTGAAGGACTACATTACAAGAAATTGAAAGCTGGAACCAATTAGG
GATGTTCCTAGCTCAAGGTTACCCAATTCCCCTAGAAGACCTATAAACCA
TCAGACAACATTGTGTTCCACAATGTGTCAAN

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAGGGATGAG
AAACACTTGAAAAACTGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCATCTCATACCAGTCAAAATGGCTAGGATGA
AAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGGAACACT
CTTCCATTGCTGGTGGGATTCCAAGCTTGTACAACCACTCTGGACATCAG
TCTGGTGGTTCCTCAGAAAAATGGACATAGTACTACTGGTAGATTCAGCA
ATACCTCTCCTGGGCATATATCTAGAATATGTTCCAACTGGTAGTAATGA
CACTTGCTCCAGTATGTTCATAGCAGCCCTATTTATAATAGCCAGAAGCT
GGAAAGAACCCAGATGTCCCTCAAAAGAGGAATGGATACAGAAAATGTGG
TACATTTACACAATGGAGTACTACTCAGCTATTAAAAGGAATGAAATTAT
GAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAGTGAGG
TAACCCAGTCACAAAAGAAGTCACTTGATATGCACTTAGTTATAAATGGA
TATTAGCCCAGAAATCTAGAATACCCACGATACAACTTCCAAAACACAAG
AAAATCAAGAAGGAAGACCAACGTGG

Query= MSMg01no299_c01.b1 MSMg01no299_c01.b1 CHROMAT_FILE:
MSMg01no299_c01.b1 PHD_FILE: MSMg01no299_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:58 2005
         (684 letters)



>mm_chr15_54044782_54045868
          Length = 1087

 Score = 1259 bits (651), Expect = 0.0
 Identities = 674/685 (98%), Gaps = 7/685 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttttgtctcactctctctacgtttttcttctttatggctatctatagaccaaaa 64
           ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gaattattttgtct--ctctctctacgtttttcttctttatggctatctatagaccaaaa 830

                                                                       
Query: 65  atgggagataaaggtgaaacttagataatataactgaattctccaaattaaatgtcatat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 atgggagataaaggtgaaacttagataatataactgaattctccaaattaaatgtcatat 770

                                                                       
Query: 125 atacaagcatgtttagaaatgttcacatgagaagaaaggacaaggaaatacaggaggcaa 184
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ataaaagcatgtttagaaatgttcacatgagaagaaaggacaaggaaatacaggaggcaa 710

                                                                       
Query: 185 tcatggaggtcacggaaagtttcctttctc-----ttgttttcaaatgcaacagatttta 239
           ||||||||||||||||||||||||||||||     |||||||||||||||||||||||||
Sbjct: 709 tcatggaggtcacggaaagtttcctttctcttcttttgttttcaaatgcaacagatttta 650

                                                                       
Query: 240 agctaatgattaaaaatgcattatgagaagacattggcaagatcattagaaaagaacatg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agctaatgattaaaaatgcattatgagaagacattggcaagatcattagaaaagaacatg 590

                                                                       
Query: 300 aaatatgaccatctcaagtaataaattaagaacataattaaataactgactactcacttc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaatatgaccatctcaagtaataaattaagaacataattaaataactgactactcacttc 530

                                                                       
Query: 360 ctcaacctttaagccaaatgctataatctgggatttaaaattaataaggaaaccatagaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctcaacctttaagccaaatgctataatctgggatttaaaattaataaggaaaccatagaa 470

                                                                       
Query: 420 acagatactgaggaaaacttccaaagaaaccttgcttcatttcactgtaatcttaaaaag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acagatactgaggaaaacttccaaagaaaccttgcttcatttcactgtaatcttaaaaag 410

                                                                       
Query: 480 tagatatttgagtgggcagtgaatcagagaagtactctgaaacatgactttaatttatta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tagatatttgagtgggcagtgaatcagagaagtactctgaaacatgactttaatttatta 350

                                                                       
Query: 540 ccaaccagaattaaataaggtctgaaggactacattacaagaaattgaaagctggaacca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccaaccagaattaaataaggtctgaaggactacattacaagaaattgaaagctggaacca 290

                                                                       
Query: 600 attagggatgttcctagctcaaggttacccaattcccctagaagacctataaaccatcag 659
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 attaaggatgctcctagctcaaggttacccaattcccctagaagacctataaaccatcag 230

                                    
Query: 660 acaacattgtgttccacaatgtgtc 684
           |||||||||||||||||||||||||
Sbjct: 229 acaacattgtgttccacaatgtgtc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1087
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1077
Effective search space:   725898
Effective search space used:   725898
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)