Query= MSMg01no300_o10.b1 MSMg01no300_o10.b1 CHROMAT_FILE:
MSMg01no300_o10.b1 PHD_FILE: MSMg01no300_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:09 2005
(334 letters)
>mm_chr15_67781928_67782661
Length = 734
Score = 607 bits (314), Expect = e-178
Identities = 329/334 (98%)
Strand = Plus / Plus
Query: 1 gtatctcagaggggttccattgtcctctacgctggtcctggacaaagaacaattttcacc 60
||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 201 gtatctcagaggggttctattgtcctctacgctggtcctggacaaggtccaattttcacc 260
Query: 61 cagaaggtctttggtatgagtattccctatagaaatcacaagtcttttcttaaggccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaaggtctttggtatgagtattccctatagaaatcacaagtcttttcttaaggccaca 320
Query: 121 agaaacaacatcacactaacacccttgatatgcctggagacatcagtcttccttactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacaacatcacactaacacccttgatatgcctggagacatcagtcttccttactctg 380
Query: 181 ttttggttctaaaaggatatatagcaatcttggcaaattaaagatgcctgtgccttgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttggttctaaaaggatatatagcaatcttggcaaattaaagatgcctgtgccttgtac 440
Query: 241 ttggcaatgccttccactacatgtttcaagcatcaatgtcacttgtgttggacctgaata 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ttggcaatgccttccactacatgtttcaagcatcaatgtcacttatgttggacctgaata 500
Query: 301 gatgcccaggatcctgtgccagccctcaggcacc 334
||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgcccaggatcctgtgccagccctcaggcacc 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_o10.g1 MSMg01no300_o10.g1 CHROMAT_FILE:
MSMg01no300_o10.g1 PHD_FILE: MSMg01no300_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:09 2005
(237 letters)
>mm_chr15_67953050_67953686
Length = 637
Score = 381 bits (197), Expect = e-110
Identities = 225/235 (95%), Gaps = 4/235 (1%)
Strand = Plus / Minus
Query: 1 ctcagtgtggatttggtttgtagaccatttcttactttgattggcccctctctttcgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctcagtgtggatttggtttgtagaccatttcttactttgattggcccctctctttcgtag 283
Query: 61 ctgttgcccacggactgccccataatgg-cagtatagaattctcagtttcttttattgat 119
||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 282 ctgttgcccacggactgtcccatg-tgggcagtatagaattctcagtttcttttcttgat 224
Query: 120 gtctgtataagtgttaatattccaaaaataataaattcataatttttttttatttagaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 223 gtctgtataagtgttaatattccaaaaataataaattcataattttttt--atttagaaa 166
Query: 180 ggaaagtactataacatatggcggctttttaacgttgtcacagtctgttattgga 234
|||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 165 ggaaagcactataacatagggcggctttttaactttgtcacagtctgttattgga 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
