Query= MSMg01no301_i12.b1 MSMg01no301_i12.b1 CHROMAT_FILE:
MSMg01no301_i12.b1 PHD_FILE: MSMg01no301_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:57 2005
(658 letters)
>mm_chr15_6955477_6956530
Length = 1054
Score = 1214 bits (628), Expect = 0.0
Identities = 646/654 (98%), Gaps = 4/654 (0%)
Strand = Plus / Plus
Query: 5 gaattccataaaccattcttccacaaggactggaaagatgagagccacactgtgagctgt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataaaccattgttccacaaggactggaaagatgagagccacactgtgagctgt 264
Query: 65 cacagtcttcccaggtcgtgaaatagcacaagaggggtgtacagccaagatagcaaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacagtcttcccaggtcgtgaaatagcacaagaggggtgtacagccaagatagcaaaaac 324
Query: 125 atgtaacaagatagatttggggcacttccaggatcaggggcaagcagcaaaagctagccc 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 atgtaacaagatagatttggggcacttccaggatgaggggcaagcagcaaaagctagccc 384
Query: 185 aatggcagttactgcagagattttcctgagttgttgggtcctggcaacaatcagagtagt 244
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 385 aatggcagttactgcagagatttgcctgagttgttgggtcctggcaaca----gagtagt 440
Query: 245 cagagaaccaatggaaatgcaacttccttggccacatctccagaaattctgaattggtcc 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagagaaccaatggaaatgcagcttccttggccacatctccagaaattctgaattggtcc 500
Query: 305 agataatttagtacagaactaggtccagaaagaagaatggactggtttccaggaaaggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agataatttagtacagaactaggtccagaaagaagaatggactggtttccaggaaaggtg 560
Query: 365 agttcaggaggagtcatcaaggaaaaagataaggcatagaagtcaaatttagatttcagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttcaggaggagtcatcaaggaaaaagataaggcatagaagtcaaatttagatttcagc 620
Query: 425 cttggcagcattcctacttaacctttgtgaggattctttcttcaaattacaaagttaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttggcagcattcctacttaacctttgtgaggattctttcttcaaattacaaagttaata 680
Query: 485 gaggcactacacaatggattcttgtttaggacaaggcttagcaacttataatagtcctgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggcactacacaatggattcttgtttaggacaaggcttagcaacttataatagtcctgt 740
Query: 545 aaggaggtggtgtagtcctcatttgacatatgaggaaacagaggcatggccggagcatct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaggaggtggtgtagtcctcatttgacatatgaggaaacagaggcatggccggagcatct 800
Query: 605 agattatctaaaaggcaaccttgctcatccatgctggagctgggatttgaacac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agattatctaaaaggcaaccttgctcatccatgctggagctgggatttgaacac 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1054
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1044
Effective search space: 676512
Effective search space used: 676512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_i12.g1 MSMg01no301_i12.g1 CHROMAT_FILE:
MSMg01no301_i12.g1 PHD_FILE: MSMg01no301_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:57 2005
(292 letters)
>mm_chr15_7006951_7007642
Length = 692
Score = 468 bits (242), Expect = e-136
Identities = 287/320 (89%), Gaps = 28/320 (8%)
Strand = Plus / Minus
Query: 1 tttcaataaaatgagattccttccttaagtgtgagaggaaaaatgtccaactgctgggtt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 tttcaataaaatgagattccttccttaagtgtgagagggaaaatgtccaactgctgggtt 320
Query: 61 cttgacatggggcaaggctggtaacttcccaggctgtcccatttcttaggtgttgtcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgacatggggcaaggctggtaacttcccaggctgtcccatttcttaggtgttgtcttg 260
Query: 121 aagcttctggcggttttaactttgctgtttcttctctactcccccacctttaaaaaaaa- 179
|||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 259 aagcttctggtggttttaactttgctgttttttctctactcccccaccttaaaaaaaaaa 200
Query: 180 ---------------------------ggaagtaggtatagagtaattaactggcagtga 212
|||||||||||||||||||||||||||| ||||
Sbjct: 199 aaaaaaaaaaaaaaaaaaaaaaaaaaaggaagtaggtatagagtaattaactggcggtga 140
Query: 213 atcccagctaagggagatggcatttccattcaggagcctgaaaaaacaagatgactcagc 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atcccagctaagggagatggcatttccattcaggagcctgaaaaaacaagatgactcagc 80
Query: 273 tctggtatattaattagagt 292
||||||||||||||||||||
Sbjct: 79 tctggtatattaattagagt 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
