TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTTTGTTTGCCTTTACTTCTGAAATTGTTAATAGTGTGAAAACACGCC
AGGAGACTGATTTCTCCGTTAATGAACCTGATGCTTTAATTTTAAAGCAC
TTGTTTAGAGTTCACTAAGGTCACTAAAAACAAATGCAAGCACTCGGTAG
CATCACAGTTAATACAACCACGGAGAGTATTTCTCCACAGATGGCCACAC
TGAGAGCAGGAAATGATCTAATACGAATTCATCACTTGGCATGTGGGGAG
GTGTGGGAGAGCCCAGAATTAAACCCTCATCACACTTGGAATTGCTATCT
TGCAGCCGTCACTCCCTCCTCCATCTCAGATGGTGAGGCACTGCCACACA
CTGGCAAAAGAAAGCCCCATAGATTGACAAACTGGATACAGCGGTGGCTG
TTCCACCCTGATGTGGCAGGCCGAAGTGGCTTCTCTTACACTCAGTCATT
TTCCTGTCCCCTGGAAAGGATTATAAAAACGTAAGTCATCAGCTCTGCTG
AAAATGCCGTCCACGTGTCCTGCTACCTGGACTTGGCTGCTTATTTACAT
TCTCACTGTTTATCATACCACTTTGAATACAGATAATCAAAATGTGAATG
TGTGTTCTTGCATGTGGATATGTATAATGCAGTAATTGAGAACTCTCCGC
CATCCCAGCATGGCATGAGGTGTTTTATATG

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGGGTCAAAATTTTGAATATGGATGGTTGG
CCCCAAGCTTCAACTAGGCCCCATTGTCTATCTACTGGAGGTGGTCTCTT
CAGGGTACATCCTCCCACTCTTGGGCATTTCAGCTAATGTCATCCCCATT
GAGTCCTGGAAGCCTCTCACATCCCAGGTCTCTGGGACTTTCTAGAGGTT
CTCCCACCCCCACCCTCACCTCATAATGCTACATATTTCAATTCATTCTC
CTGCCCCTCTGGGCTTCTCTCTTGTATTCCCCCACACCTGATCCTGCCTC
CCTTTCCCCTTTCCTCTCCCATCTCCCACCCAAGTTCCTCCCTCGCTCTG
CCTCCCATGATTATTTTGTTCCCCCTTCAAAGTGGGTTTGAAGCATCCAC
ACTTGCATGCAGGATGAAACCTGACACTACTACTAATGTTGTGCTTGTAG
ACAGGATCCTGGCATGGGTGTCCTCTGAGAGGCCCTACCAGCAGCTGACT
GAGAAAAATGCAGATACTTAGAGCCAACCACTAGATTGAGGTTAGGGACC
AATATGGAAGAGTTAGAGGAAGGACTGAAGGAGCTGACAGGGACTGCCAT
CCCATAGGAAAAGTAACAGTGTCAACTAACCTGGATCCCTCAGAGCTCCC
AGAGACTAAGTCACCAACCAAAGAGCN

Query= MSMg01no301_n22.b1 MSMg01no301_n22.b1 CHROMAT_FILE:
MSMg01no301_n22.b1 PHD_FILE: MSMg01no301_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:22 2005
         (604 letters)



>mm_chr15_95322531_95323534
          Length = 1004

 Score = 1021 bits (528), Expect = 0.0
 Identities = 564/588 (95%), Gaps = 19/588 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttttgtttgcctttacttctgaaattgttaatagtgtgaaaacacgccaggag 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gaattctttttgtttgtctttacttctgaaattgttaatagtgtgaaaacacgccaggag 529

                                                                       
Query: 65  actgatttctccgttaatgaacctgatgctttaattttaaagcacttgtttagagttcac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 actgatttctccgttaatgaacctgatgctttaattttaaagcacttgtttagagttcac 469

                                                                       
Query: 125 taaggtcactaaaaacaaatgcaagcactcggtagcatcacagttaatacaaccacggag 184
           ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 468 taaggtcactaaagacaaatgcaaacactcggcagcatcacagttaatacaaccatggag 409

                                                                       
Query: 185 agtatttctccacagatggccacactgagagcaggaaatgatctaatacgaattcatcac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agtatttctccacagatggccacactgagagcaggaaatgatctaatacgaattcatcac 349

                                                                       
Query: 245 ttggcatgtggggaggtgtgggagagcccagaattaaaccctcatcacacttggaattgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttggcatgtggggaggtgtgggagagcccagaattaaaccctcatcacacttggaattgc 289

                                                                       
Query: 305 tatcttgcagccgtcactccctcctccatctcagatggtgaggcactgccacacactggc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tatcttgcagccgtcactccctcctccatctcagatggtgaggcactgccacacactggc 229

                                                                       
Query: 365 aaaagaaagccccataga-------------------ttgacaaactggatacagcggtg 405
           ||||||||||||||||||                   |||||||||||||||||||||||
Sbjct: 228 aaaagaaagccccatagattgacagattcccactcagttgacaaactggatacagcggtg 169

                                                                       
Query: 406 gctgttccaccctgatgtggcaggccgaagtggcttctcttacactcagtcattttcctg 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gctgttccaccctgatgtggcaggccgaagtggcttctcttacactcagtcattttcctg 109

                                                                       
Query: 466 tcccctggaaaggattataaaaacgtaagtcatcagctctgctgaaaatgccgtccacgt 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcccctggaaaggattataaaaacgtaagtcatcagctctgctgaaaatgccgtccacgt 49

                                                           
Query: 526 gtcctgctacctggacttggctgcttatttacattctcactgtttatc 573
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  gtcctgctacctggacttggctgcttatttacattctcactgtttatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)