Query= MSMg01no301_o11.b1 MSMg01no301_o11.b1 CHROMAT_FILE:
MSMg01no301_o11.b1 PHD_FILE: MSMg01no301_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:25 2005
(362 letters)
>mm_chr15_65901834_65902596
Length = 763
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 1 taaagtttccagaacctccacaaatagggtcaccagctgggaacctgtgtgggacagtcc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 taaagtttccagaacctccacaaatagtgtcaccagctgggaacctgtgtgggacagtcc 260
Query: 61 atacaaactcaggattcttttcaagatgagtccagtattgcactggtaggaaagggcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacaaactcaggattcttttcaagatgagtccagtattgcactggtaggaaagggcaag 320
Query: 121 aagagggtgtcaatgttgcatctgtctcactgcaattccacatctatgctcctt-cttgt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aagagggtgtcaatgttgcatctgtctcactgcaattccacatctatgctcctttcttgt 380
Query: 180 tctttgcaatggatggaaaagtacctggaaggtgtcaatttcaaaagaaaaccttcactc 239
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tctttgcaatggatggaaaagtacctggaaggcatcaatttcaaaagaaaaccttcactc 440
Query: 240 tctgccatagaacacataaagaatctcttttataagacaagctagaaaactggaatctca 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgccatggaacacataaagaatctcttttataagacaagctagaaaactggaatctca 500
Query: 300 atatcaatgctggaaacacaatggggatccaacatcccttcctcacttatatttcccctt 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatcaatgttggaaacacaatggggatccaacatcccttcctcacttatatttcccctt 560
Query: 360 ttg 362
|||
Sbjct: 561 ttg 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 763
Length adjustment: 9
Effective length of query: 353
Effective length of database: 754
Effective search space: 266162
Effective search space used: 266162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_o11.g1 MSMg01no301_o11.g1 CHROMAT_FILE:
MSMg01no301_o11.g1 PHD_FILE: MSMg01no301_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:25 2005
(647 letters)
>mm_chr15_66072555_66073602
Length = 1048
Score = 1172 bits (606), Expect = 0.0
Identities = 638/652 (97%), Gaps = 9/652 (1%)
Strand = Plus / Minus
Query: 1 caagtagacaaattccagaatttgtccagaagaagtccagctgggaacttaaagaggttt 60
||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||
Sbjct: 848 caagtagacaaattccagaat---tcca-aagaagcccagctgggaacttaaagaggttt 793
Query: 61 tgggaaatcccatcttagtaataaagagttaaagatcttcatttctttttcttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tgggaaatcccatcttagtaataaagagttaaagatcttcatttctttttcttttttttt 733
Query: 121 --aacagagaaaaatctttt---ttttttttgctaaaaaaattaaattaaaacaaaacag 175
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 732 taaacagagaaaaatcttttttattttttttgctaaaaaaattaaattaaaacaaaacag 673
Query: 176 taaacttgtgtacctgaaaacatatgcctccttttccacaggtggaagtgtcacagtaat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 taaacttgtgtacctgaaaacatatgcctccttttccacaggtggaagtgtcacagtaat 613
Query: 236 tcccaaatctaggtcctttgcagctagacctctgtgatgtggggtgaggcatgtgacata 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcccaaatctaggtcctttgcagctagacctctgtgatgtggggtgaggcatgtgacata 553
Query: 296 aaagcctgcttcttcttctgagaactagggcatggctgggaactggacatcaactgactt 355
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 552 aaagcctgcttcttcttctgagaactagggcgtggctgggaactggacatcaactgactt 493
Query: 356 attctgtgtgagaggaattagtgcttctcagtgcacagtcatcaccacagcaaacctgtt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 attctgtgtgagaggaattagtgcttctcagtgcacagtcatcaccacagcaaacctgtt 433
Query: 416 tagaaaatttaccctggagtgttttaacttcacatatactctgtcatccttggaaggtcc 475
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tagaaaatttcccctggagtgttttaacttcacatatactctgtcatccttggaaggtcc 373
Query: 476 ctaagccatcataatggccagaatactgtcgcttctcctggtaacatttctccctctgca 535
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 ctaagccatcataatggccagaatactgtcgtttctcctggtaacatttctccctctgca 313
Query: 536 tggaaaaaagccaagtggttcttcccactttgggaacagcagaaatgtctgggaccttgg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tggaaaaaagccaagtggttcttcccactttgggaacagcagaaatgtctgggaccttgg 253
Query: 596 acagagacagatctagacttagatatactcttcaaagtttcaagtcagcact 647
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 252 acagagacagatctagacttagatacactcttcaaagtttcaagtcagcact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
