Query= MSMg01no301_o22.b1 MSMg01no301_o22.b1 CHROMAT_FILE:
MSMg01no301_o22.b1 PHD_FILE: MSMg01no301_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:27 2005
(609 letters)
>mm_chr15_50553736_50554746
Length = 1011
Score = 1123 bits (581), Expect = 0.0
Identities = 600/607 (98%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggtcttcacacttgcatagaaattacctcaccaattgagttttcttcccaata 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggtcttcacacttgcataaaaattacctcaccaattgagttttcttcccaata 264
Query: 65 ttttattcttgaatattattagctaatctttttttgtgtcatataacaagtttacagatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttattcttgaatattattagctaatctttttttgtgtcatataacaagtttacagatt 324
Query: 125 ttt--caaccaactataaattaaatcattaaggtggtagatactactaacccttttacgt 182
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 tttttcaaccaactataaattaaatcataaaggtggtagatactactaacccttttacgt 384
Query: 183 ggtttgggtttcaaaggcttatataaaagcacatagactttcaatatgcaagtaaaggat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtttgggtttcaaaggcttatataaaagcacatagactttcaatatgcaagtaaaggat 444
Query: 243 gtttttggatattgcacagtaatattcatgtcatacagataaacttccacaatcattgaa 302
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 gtttttggatattgcacagtaatattaatgtcatacagataaacttccacaatcattgaa 504
Query: 303 tctatatgtgaacaaataaggaaggattttcagacttctttttatgttcgcaagctacct 362
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 tctatatgtgaacaaataaggaaggattttcagacttctttttatgttctcaagctacct 564
Query: 363 aaaaaagacttaaaagtcaattagaactctttccatatgctattcatttatcattaatta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaaaagacttaaaagtcaattagaactctttccatatgctattcatttatcattaatta 624
Query: 423 atgatattgtagcaatccaactgatattattagatgactcaagcaaacaaaggctgtggt 482
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgatattgtagcaatccaactcatattattagatgactcaagcaaacaaaggctgtggt 684
Query: 483 ataattaaatgtagatcctgagctaatgtgccttgtagttcatttatgaggaaaaacaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataattaaatgtagatcctgagctaatgtgccttgtagttcatttatgaggaaaaacaaa 744
Query: 543 tataagtgaatgtatatcaggtgatttaaaggttattttgagaaagattctagataataa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tataagtgaatgtatatcaggtgatttaaaggttattttgagaaagattctagataataa 804
Query: 603 atgatat 609
|||||||
Sbjct: 805 atgatat 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1011
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1001
Effective search space: 599599
Effective search space used: 599599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_o22.g1 MSMg01no301_o22.g1 CHROMAT_FILE:
MSMg01no301_o22.g1 PHD_FILE: MSMg01no301_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:27 2005
(151 letters)
>mm_chr15_50724344_50724898
Length = 555
Score = 277 bits (143), Expect = 3e-79
Identities = 151/155 (97%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ttccttattttctgagatgtcctacaaaagcccaggttgtggggttg--ttttttttttt 58
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 355 ttccttattttctgagatgtcctacaaaagcccaggttgtggggttgttttttttttttt 296
Query: 59 gttt--tttttaatgtccagcctccatttttcagaaagttattgctttaaaagtgtgagg 116
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gttttgtttttaatgtccagcctccatttttcagaaagttattgctttaaaagtgtgagg 236
Query: 117 atggtttgaagagctttacatatgtttgacagcag 151
|||||||||||||||||||||||||||||||||||
Sbjct: 235 atggtttgaagagctttacatatgtttgacagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 555
Length adjustment: 8
Effective length of query: 143
Effective length of database: 547
Effective search space: 78221
Effective search space used: 78221
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
