Query= MSMg01no302_b19.b1 MSMg01no302_b19.b1 CHROMAT_FILE:
MSMg01no302_b19.b1 PHD_FILE: MSMg01no302_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:40 2005
(319 letters)
>mm_chr15_34534923_34535641
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttacagacaaactttataatcctagaagagatctctgcttccaaaagccattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggaattcttacagacaaactttataatcctagaagagatctctgcttccaaaagccattt 459
Query: 64 tatattaatgaagtctatttcaaaataaatcccatacagaaaagtttaactgcttccaga 123
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 458 tatattaatgaagtctatttcaaaataaattccacacagaaaagtttaactgcttccaga 399
Query: 124 tatttgtaacatagtttaaaataattctttaataatagttacaattgagtagcactttaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 398 tatttgtaacatagtttaaaataattctttaataatagttacaattgagtagaactttaa 339
Query: 184 ttattaggggacttttatactaatttggaatctaatctagaatgtaactgcatctctaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttattaggggacttttatactaatttggaatctaatctagaatgtaactgcatctctaag 279
Query: 244 aactataggagtgatcagctctatgctaacacctttgagctgaattttgggttaaatatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aactataggagtgatcagctctatgctaacacctttgagctgaattttgggttaaatatg 219
Query: 304 ttgaatatcttaata 318
|||||||||||||||
Sbjct: 218 ttgaatatcttaata 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_b19.g1 MSMg01no302_b19.g1 CHROMAT_FILE:
MSMg01no302_b19.g1 PHD_FILE: MSMg01no302_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:40 2005
(458 letters)
>mm_chr15_34368153_34369010
Length = 858
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%), Gaps = 2/459 (0%)
Strand = Plus / Plus
Query: 1 aatgccctctactggcctcaatgggaatcaggcatgcaagtggtacacagacaagcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgccctctactggcctcaatgggaatcaggcatgcaagtggtacacagacaagcacaa 260
Query: 61 cacccatacatgcaaatcttcaacaaacactttaggcatacattcgaatgaatactgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacccatacatgcaaatcttcaacaaacactttaggcatacattcgaatgaatactgtat 320
Query: 121 gcaagtgcccagagtctagaaaacagtgtacagcaacccccaacaccttaaatgctcagt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gcaagtgcccagagtctagaaaacagtgtacagcaaccctcaacaccttaaatgctcagt 380
Query: 181 gttagctgtgacaattttattcttcaccaccagtctctcacaagatggggcctgggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttagctgtgacaattttattcttcaccaccagtctctcacaagatggggcctgggagga 440
Query: 241 ttatactgagtagatgaagaccactgtttgctttgactctgaaccagatggaatagcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatactgagtagatgaagaccactgtttgctttgactctgaaccagatggaatagcaag 500
Query: 301 ttaaatggtaagtggacacaatattgaaaactactattaacaagacaaaacgcttagccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaatggtaagtggacacaatattgaaaactactattaacaagacaaaacgcttagccg 560
Query: 361 ggcgtggtggcgcacgcctttaatgccagcacttgggaggcagaggcaggcggatttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcgtggtggcgcacgcctttaatgccagcacttgggaggcagaggcaggcggatttctg 620
Query: 421 agttcgaggctagcctgg-cttacgaagtgagttccagg 458
|||||||||||||||||| || |||||||||||||||||
Sbjct: 621 agttcgaggctagcctggtct-acgaagtgagttccagg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
