Query= MSMg01no302_c19.b1 MSMg01no302_c19.b1 CHROMAT_FILE:
MSMg01no302_c19.b1 PHD_FILE: MSMg01no302_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:45 2005
(323 letters)
>mm_chr15_55761026_55761748
Length = 723
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%)
Strand = Plus / Minus
Query: 5 gaattctgttccaggatgtatgatgggcactttccatcagtaatgcctctcaatgaaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaattctgttccaggatgtatgatgggcactttccatcagtaatgcctctcaatgaaagt 416
Query: 65 tcatgaaacacattattattagacactgagaaaattaagactcaaatattatgtttttag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcatgaaacacattattattagacactgagaaaattaagactcaaatattatgtttttag 356
Query: 125 agttcaaaacgttttaaatatgaggaggtattaattgggcacgtgaaataaaaattcagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agttcaaaacgttttaaatatgaggaggtattaattgggcacgtgaaataaaaattcagt 296
Query: 185 gacatttttcaataaaaagccaggtaagtacaaaaaaaatgtatcagtttcaatgacttt 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 295 gacatttttcaataaaaagccaggtaagtacaaagaaaatgtatcagtttcaatgacttt 236
Query: 245 gagcagagctgcatgatatgcataactcagagagcaaggctgtgtttcaataaaacttta 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gaacagagctgcatgatatgcataactcagagagcaaggctgtgtttcaataaaacttta 176
Query: 305 ttaacaaacactgaattt 322
||||||||||||||||||
Sbjct: 175 ttaacaaacactgaattt 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_c19.g1 MSMg01no302_c19.g1 CHROMAT_FILE:
MSMg01no302_c19.g1 PHD_FILE: MSMg01no302_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:45 2005
(289 letters)
>mm_chr15_55608795_55609483
Length = 689
Score = 489 bits (253), Expect = e-143
Identities = 263/267 (98%), Gaps = 2/267 (0%)
Strand = Plus / Plus
Query: 1 actacatagtttgaggctggcagtgaacattggacttctgatctttctgccaagttctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 actacatagtttgaggctggcagtgaacattggacttctgatctttctgccaagttctga 258
Query: 61 gattacagacatgttccaccacaccctgctt--aaaaaaattctttatggaactctacaa 118
||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||
Sbjct: 259 gattacagacatgttccaccacatccttctttaaaaaaaattctttatggaactctacaa 318
Query: 119 tggggtgtgacttactattaaacaagaatctatacatatgatttggggctatccaaagtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggggtgtgacttactattaaacaagaatctatacatatgatttggggctatccaaagtg 378
Query: 179 acttctccattgaagtcagagtttgggttattagcatgttctcatgccttgatttgtata 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acttctccattgaagtcagagtttgggttattagcatgttctcatgccttgatttgtata 438
Query: 239 cgtcagacctgacatcaaagagatgaa 265
|||||||||||||||||||||||||||
Sbjct: 439 cgtcagacctgacatcaaagagatgaa 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
