TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTCTCTCTTACTCTTCAATTATTTTTCTAAGGCAAAACCACTTGTT
TATCCAAGATCACCACAGCAGCTGCCTGGCCTAGATGGACAGGGAGCTAT
ACAGATTGATCTGTCTCTAGGCTAGTGCTGTGTTTGAAGGTTAAAGACTT
GAGCCATACTACCTTGGTTTGAAGTAGGTTATGGCATTCCAAACTCAGGT
CTTCCTGCTATTGTGGCTGGCACTTTATCAATAGAATGATCCCTCTAGCT
CCAAAGTAGAATTAACTAACCAGTACCCCCAGAGCTCCTATCTCTAGCTG
CATATGTAGCAGAAGATGGCCTAGTCAGCCATCAGTGGAAGACAGGCCCC
TTGGTCATGCAAACTTTATCTGCCTCAGTACAGGGGAACGCCAGGGCCAA
GAAGTGGGAGTGGGTGGGTAGGGGAATTGGGCNNNNNNNNCNNNNNNNCC
TCTTTTCCTTCTCCCTCTTTTTTTCCCTTCTTTTTTTTCTTCTTCCCTTT
TTTTTCCCTCCCCTTGCTTTTTTTCCCCTTTCTTTTCCCCCTTTTCCTTT
CTTCCCTTTCCCTCGCCCTCTTTTTCTCCCTCCCCCCCTTTCTTTCCCCT
TCCTTTCTTTCTCCCCTTTTTTTTTTCTTTCTTCCCCTTTTTCGCCTTTT
CCCCCCCTCCCCCCTTTTTCTTTT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAAATCTGGGCTCACTATTGGTTAAAGAACT
CCATGGGAAAGTACTTTAGTTTTTTTTAACATGACACCAACACATGAATC
ATGATTGAGAGTTAATCAGCAATATATATAATATGTGAAGAAAATGTATA
ATTTTAGAGACTTGACAATAAAATATGGTCTTTGACTTTTATGATGTTAA
AAATGGCTTCTTTTGTGGCATTAGTACTAAATCAGACTGAGCATAAATGT
TTTAGTGATAAAGTGATGAAGAAGGAAGGTTAAAATCTTAGTATGTGTAT
TTTGCTCTCATTTATATTGATTAATAAAATGATTAATAATCTGATGTCTA
ATTTTTGTATATTGTAATATTTAAAATTGCTATCACTTGTACACTCTTCA
TGATTTAACCAGTGGGAAAACTAAAATACCTTTTTTGTAATTTTAATTAA
CTTTGCAATGTTAATGTTAACTTTTGGTAAAAATTAATGCTTGATGTCAA
ATACACAATGACTTGAAACAGTTACTGATCTGCTATTCTGTTGCAAGGCA
TCCAGTGGCTCACAAGGACCAGTACACCTGAATGGCAGGGAAACTAGGCG
ACAGGAGAGAGATGAAACCAAGACAGCATTCTGATCAAGGTTCATATTTT
TAATGGTGAACAGGCTTTATATAGGAGAGGTGAAGCCCATTCC

Query= MSMg01no302_j16.g1 MSMg01no302_j16.g1 CHROMAT_FILE:
MSMg01no302_j16.g1 PHD_FILE: MSMg01no302_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:17 2005
         (565 letters)



>mm_chr15_17814674_17815638
          Length = 965

 Score = 1000 bits (517), Expect = 0.0
 Identities = 553/565 (97%), Gaps = 1/565 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatctgggctcactattggttaaagaactccatgggaaagtactttagttttttttaac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 202 aaatctgggctcactattggttaaagaactccatgggaaagtactttagttttttt-aac 260

                                                                       
Query: 61  atgacaccaacacatgaatcatgattgagagttaatcagcaatatatataatatgtgaag 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 atgacaccaacacatgaatcatgattgagagttaatcagcaatacatataatatgtgaag 320

                                                                       
Query: 121 aaaatgtataattttagagacttgacaataaaatatggtctttgacttttatgatgttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatgtataattttagagacttgacaataaaatatggtctttgacttttatgatgttaa 380

                                                                       
Query: 181 aaatggcttcttttgtggcattagtactaaatcagactgagcataaatgttttagtgata 240
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 381 aaatggcttcttttgtggcattagtactaaatcagactgagcataaaggttttagtggta 440

                                                                       
Query: 241 aagtgatgaagaaggaaggttaaaatcttagtatgtgtattttgctctcatttatattga 300
           | |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||
Sbjct: 441 atgtgatgaagaaggaagtttaaaatcttagtatgtgaattttgctatcatttatattga 500

                                                                       
Query: 301 ttaataaaatgattaataatctgatgtctaatttttgtatattgtaatatttaaaattgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaataaaatgattaataatctgatgtctaatttttgtatattgtaatatttaaaattgc 560

                                                                       
Query: 361 tatcacttgtacactcttcatgatttaaccagtgggaaaactaaaataccttttttgtaa 420
           ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 tatcacttgtacacttttcatgatttaaccagtgggaaaactaaaattccttttttgtaa 620

                                                                       
Query: 421 ttttaattaactttgcaatgttaatgttaacttttggtaaaaattaatgcttgatgtcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttaattaactttgcaatgttaatgttaacttttggtaaaaattaatgcttgatgtcaa 680

                                                                       
Query: 481 atacacaatgacttgaaacagttactgatctgctattctgttgcaaggcatccagtggct 540
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 atgcacaatgacttgaaacagttactgatctgctattctgttgcaagccatccagtggct 740

                                    
Query: 541 cacaaggaccagtacacctgaatgg 565
           |||||||||||||||||||||||||
Sbjct: 741 cacaaggaccagtacacctgaatgg 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)