Query= MSMg01no305_b08.b1 MSMg01no305_b08.b1 CHROMAT_FILE:
MSMg01no305_b08.b1 PHD_FILE: MSMg01no305_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:34 2005
(336 letters)
>mm_chr15_53350222_53350954
Length = 733
Score = 574 bits (297), Expect = e-168
Identities = 324/335 (96%), Gaps = 5/335 (1%)
Strand = Plus / Plus
Query: 1 tgaacgggcatcattttctgcaagagagtctcctcacgtgttcggcatcatctgcagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacgggcatcattttctgcaagagagtctcctcacgtgttcggcatcatctgcagcta 260
Query: 61 accaatcttccttggggaacaaaatattcagttgactgaattttcattataaagaaagca 120
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaatcctccttggggaacaaaatattcagttgactgaattttcattataaagaaagca 320
Query: 121 aaaagaaaaggaagcgatacccgggggggg-tgatagttcaattataaatatctatattt 179
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aaaa----aggaagcgatacccgggggggggtgatagttcaattataaatatctatattt 376
Query: 180 tattttgcattttcttctctgaagtttcctagttgggctctgacagggtgtcacagaggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tattttgcattttcttctctgaagtttcctagttgggctctgacagggtgtcacagaggg 436
Query: 240 cagaccctaaggacgtgtttgtaggtaacttggtttttaagattaggctagatgaagaga 299
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 437 cagaccctaaggacgtgtttgtaggtaacttggtttttaagaggaggctagatgaagaga 496
Query: 300 gacttgtccttctggcatccttcctgtgttctgta 334
||||||||||||||||||||||||||||||||||
Sbjct: 497 aacttgtccttctggcatccttcctgtgttctgta 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 733
Length adjustment: 9
Effective length of query: 327
Effective length of database: 724
Effective search space: 236748
Effective search space used: 236748
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_b08.g1 MSMg01no305_b08.g1 CHROMAT_FILE:
MSMg01no305_b08.g1 PHD_FILE: MSMg01no305_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:34 2005
(583 letters)
>mm_chr15_53437314_53438296
Length = 983
Score = 922 bits (477), Expect = 0.0
Identities = 523/539 (97%), Gaps = 3/539 (0%)
Strand = Plus / Minus
Query: 1 gagaatggctagaggccaagttcatgagtcccttgccgtccaattttgcctgagcatttt 60
|||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 538 gagaatggctaggggccaagttcatgagtcccttgccatggaattttgcctgagcatttt 479
Query: 61 cctaaataggacatctatgaagaaagatgggtcttggcccgaagaccaacctccccatat 120
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tctaaatagtacatctgtgaagaaagatgggtcttggcccgaagaccaacctccccatat 419
Query: 121 ctcacgtacacttcaccttgcttactaccgtgagtagccaatgtggctgtatctagtctt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 418 ctcacgtacacttcaccttgcttactaccgtgagtatccaatgtggctgtatctagtctt 359
Query: 181 atgtgagactttattccccaagtattggaatgtacgtatctgaggcctggagctgagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atgtgagactttattccccaagtattggaatgtacgtatctgaggcctggagctgagaat 299
Query: 241 atttgttccattctttaaataatttctcattggtgacatttctgttagagaactgttccc 300
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 298 atttgttccattctttaaagaatttctcattggtgacatttctgttagagaactattccc 239
Query: 301 agtgagcttagtgtggcaaacctatagaaactttgatactaaggcaggaggatacagagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agtgagcttagtgtggcaaacctatagaaactttgatactaaggcaggaggatacagaga 179
Query: 361 ttgagacaatcctgaactgcatgtcaagatattatctcaaaactatcaatataagtcagt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 178 ttgagacaatcctgaactgcatgtcaagatattatctcaaaactatcgatataagtcagt 119
Query: 421 agcagagcacaggtttagcatgcacaagcccttgattttatccccaacaacacaacacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 agcagagcacaggtttagcatgcacaagcccttgattttatccccaacaacacaacacaa 59
Query: 481 tacacacagagcaggggggttgggg--tgggaagggagaggcagaggcagaagggagag 537
|||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 58 tacatacagagcaggggggttggggcatgg-aagggagaggcagaggcagaagggagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
