Query= MSMg01no308_a12.b1 MSMg01no308_a12.b1 CHROMAT_FILE:
MSMg01no308_a12.b1 PHD_FILE: MSMg01no308_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:15 2005
(346 letters)
>mm_chr15_8393014_8393758
Length = 745
Score = 636 bits (329), Expect = 0.0
Identities = 341/347 (98%), Gaps = 5/347 (1%)
Strand = Plus / Plus
Query: 1 tttaggctaaaaagtatccagagagttttatgtagtcatttaaaattatccttacataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaggctaaaaagtatccagagagttttatgtagtcatttaaaattatccttacataac 260
Query: 61 agatacaaatacaaagtgtcggagtaaacctgtcaagttctttctacttggtctttgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatacaaatacaaagtgtcggagtaaacctgtcaagttctttctacttggtctttgaat 320
Query: 121 aaaaagtccatgtgcaacacactctgtcaaacaacataaaagctcctgggcggggatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagtccatgtgcaacacactctgtcaaacaacataaaagctcctgggcggggatgtg 380
Query: 181 cagtgtgcacaacgctagggttttctagattaaatatacatgtggacggtttgatccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgtgcacaacgctagggttttctagattaaatatacatgtggacggtttgatccttt 440
Query: 241 tacaaaggatattt--agtctttattaactttccaaaacgtccaaacaagtttggcagag 298
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacaaaggaaa---ccagtctttattaactttccaaaacgtccaaacaagtttggcagag 497
Query: 299 aattaccactgtagccgtgtctgagtatttacatttgtttcactaac 345
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aattaccactgtagccgtgtctgagtatttacatttgtttcactaac 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 745
Length adjustment: 9
Effective length of query: 337
Effective length of database: 736
Effective search space: 248032
Effective search space used: 248032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_a12.g1 MSMg01no308_a12.g1 CHROMAT_FILE:
MSMg01no308_a12.g1 PHD_FILE: MSMg01no308_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:15 2005
(235 letters)
>mm_chr15_8542013_8542647
Length = 635
Score = 408 bits (211), Expect = e-118
Identities = 229/235 (97%)
Strand = Plus / Minus
Query: 1 ctctccatgatgctatccctggaggcttatggcaaagtttagggacaagatatgaagagc 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 435 ctctccatgatgctatccctggagacttatggcaaagtttagggacaagatatgaagaac 376
Query: 61 cacagggagatagactgtccacactgatgctgtttagggtcacccaaggtggatctgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cacagggagatagactgtccacactgatgctgtttagggtcacccaaggtggatctgaga 316
Query: 121 tgatgcatgtctgaaacaggcctgacaggggacataccatctacactcctgactggttaa 180
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 315 ttatgcatgtctgaaacaggcctgacagaggacataccatctacactcctgactggttaa 256
Query: 181 tgcttcagatagccttcctgaagttaacacaaagaatatttttcttttttaatac 235
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 255 tgcttcagatagccttcctgaagttaatataaagaatatttttcttttttaatac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
