Query= MSMg01no309_a05.b1 MSMg01no309_a05.b1 CHROMAT_FILE:
MSMg01no309_a05.b1 PHD_FILE: MSMg01no309_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:29 2005
(320 letters)
>mm_chr15_102524696_102525416
Length = 721
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcattccgagcggggagggtgatttattcttcaaatataccgacaagtgcgggcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattccgagcggggagggtgatttattcttcaaatataccgacaagtgcgggcat 264
Query: 65 gatggagcccattaaaatgttgggagattgtttttatgattgaagtctgtattactccaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatggagcccattaaaatgttgggagattgtttttatgattgaagtctgtattactccaa 324
Query: 125 ccataaagaaagagagcaaggagtcattagcattttcatgatggtgtatttctgcttgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccataaagaaagagagcaaggagtcattagcattttcatgatggtgtatttctgcttgtc 384
Query: 185 tccgcgccatcactcatctttactgcccgtccctttgctctcgctctgctacaacgagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccgcgccatcactcatctttactgcccgtccctttgctctcgctctgctacaacgagga 444
Query: 245 gagactgaagcctgagctggggttgggggctgcgggaggtgggagccagagatcccccc- 303
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 gagactgaagcctgagctggggttgggggctgcgggaggcgggagccagagatccccccc 504
Query: 304 gatgctctgcccttc 318
|| ||||||||||||
Sbjct: 505 gacgctctgcccttc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_a05.g1 MSMg01no309_a05.g1 CHROMAT_FILE:
MSMg01no309_a05.g1 PHD_FILE: MSMg01no309_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:29 2005
(349 letters)
>mm_chr15_102692571_102693319
Length = 749
Score = 644 bits (333), Expect = 0.0
Identities = 345/349 (98%)
Strand = Plus / Minus
Query: 1 attcctggcttcaattacagactaccaggcgactggagagtctgtcattgccgatgtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 attcctggcttcaattacagactaccaggcgactggagagtctgtcattgccgatgtcat 490
Query: 61 cacatttacaagagtcataggtaccctctcaggtaggcttcaggaatgaaggactcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cacatttacaagagtcataggtaccctctcaggtaggcttcaggaatgaaggactcttca 430
Query: 121 cagctgccaccagctgccccacccccactgtacgcagaggcagaatctcaagaagctgga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 429 cagctgccaccagctgccccacccccactgtacgcagaggcagaatctcaagaaactgga 370
Query: 181 gctgagaagctgttgttgtgtcccctcattccagccagagggctggagaattttccatgt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 369 gctgagaagctgttgttgtgtcccctcattccagccagagggttggagaattttccatgt 310
Query: 241 atgtccaccgctcaagttattgcctccatgtttcagagcaggttggactgaacttgagag 300
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 309 atgtccaccgctcaagtcattgcctccatgttgcagagcaggttggactgaacttgagag 250
Query: 301 cacaatattctcactttcaagaggtctcccgtagggacagatttttatg 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cacaatattctcactttcaagaggtctcccgtagggacagatttttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
