Query= MSMg01no312_g15.b1 MSMg01no312_g15.b1 CHROMAT_FILE:
MSMg01no312_g15.b1 PHD_FILE: MSMg01no312_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:29 2005
(239 letters)
>mm_chr15_7625316_7625955
Length = 640
Score = 404 bits (209), Expect = e-117
Identities = 230/237 (97%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 2 gaactgcattaaagggtcatagcattgggaaagtcgagagccacactgctagtgtgtacc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaactgcattaaagggtcatagcattgggaaagtcgagagccacactgctagtgtgtacc 261
Query: 62 accccatagactgttccacttaagcaacctgcacacgtcaataaaataagctgataaatg 121
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 atcccatagactgttccacttaagcaacctgcacacgttaataaaataagctgataaatg 321
Query: 122 acagctgcccccagcatactacgtcatgctcagtggtcagagcccttgaggagtgacaga 181
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acacctgcccccagcatactaagtcatgctcagtggtcagagcccttgaggagtgacaga 381
Query: 182 -atgaatggaccctgggctttattacttcctgagagtgatgcagactgaaaggtgaa 237
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 382 gatgagtggaccctgggctttattatttcctgagagtgatgcagactgaaaggtgaa 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_g15.g1 MSMg01no312_g15.g1 CHROMAT_FILE:
MSMg01no312_g15.g1 PHD_FILE: MSMg01no312_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:29 2005
(308 letters)
>mm_chr15_7783695_7784402
Length = 708
Score = 549 bits (284), Expect = e-161
Identities = 302/308 (98%)
Strand = Plus / Minus
Query: 1 gcaaaggctaaaatgtatgctctaacactttgcaaaatatggctgccaaaagagaggaga 60
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 508 gcaaaggctaaaatgtacgctctaacactttgcaaaatatggctgtcaaaagagaggaga 449
Query: 61 catgtggtaaggaagacacagttccctgtgggaaatgagtctctaagagtgagttgttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 catgtggtaaggaagacacagttccctgtgggaaatgagtctctaagagtgagttgttca 389
Query: 121 tgtgaacaacatctgacaggtttagcacacagacacatgactaaccaggctgacttctaa 180
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 388 tgtgaacaacatctgacaggtttagcacatagacacgtgactaaccaggctgacttctaa 329
Query: 181 tgtcttgttttatagccttggatacagctctcacttggacacactctcaaatgctccctg 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 328 tgtcttgttttatagccttggatacagctttcacttggacacactctcaaatgctccctg 269
Query: 241 aaatgcagcgacatttaagggtactgcggttaagatgcacttccatgcctagacacctcg 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaatgcagcgacatttaagggtattgcggttaagatgcacttccatgcctagacacctcg 209
Query: 301 atgctcgg 308
||||||||
Sbjct: 208 atgctcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
