Query= MSMg01no313_a12.b1 MSMg01no313_a12.b1 CHROMAT_FILE:
MSMg01no313_a12.b1 PHD_FILE: MSMg01no313_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:16 2005
(676 letters)
>mm_chr15_99658317_99659392
Length = 1076
Score = 1263 bits (653), Expect = 0.0
Identities = 671/677 (99%), Gaps = 1/677 (0%)
Strand = Plus / Plus
Query: 1 gaagacagctacagtgtactcatatgcataaaat-aaataaataaatcttaaaaaacaaa 59
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 200 gaagacagctacagtgtactcatatgcataaaataaaaaaaataaatcttaaaaaacaaa 259
Query: 60 atgaaacgatacaaggtctcacctaatggtctaatctggacttccaattgtgatcctgct 119
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgaaacaacacaaggtctcacctaatggtctaatctggacttccaattgtgatcctgct 319
Query: 120 tcaacacgtgtgcaccactgtaacctggttttatctggtgctggcattgagcccagctgg 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaactcgtgtgcaccactgtaacctggttttatctggtgctggcattgagcccagctgg 379
Query: 180 acactggggaatcactctacccagagcgccacatctccagcagaacagattttacttaac 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 acactggggaatcactctacccagagctccacatctccagcagaacagattttacttaac 439
Query: 240 aaggagaaagagattttttttcaaaagcaagcatgctacactgaggaggggatggggagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaggagaaagagattttttttcaaaagcaagcatgctacactgaggaggggatggggagt 499
Query: 300 gggttccatccaacactgctggtgggaaggcaaagcctcttgggaagacatttgtcacct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggttccatccaacactgctggtgggaaggcaaagcctcttgggaagacatttgtcacct 559
Query: 360 tcttgccaaaactaaacacaaatgtcaacgtttactctcagactttatcccacagacacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttgccaaaactaaacacaaatgtcaacgtttactctcagactttatcccacagacacc 619
Query: 420 cttacataaggtggtgcacgcctttaatcccagcacttgggaggcagaggcaggcgaatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttacataaggtggtgcacgcctttaatcccagcacttgggaggcagaggcaggcgaatt 679
Query: 480 tctgagttcgaggccagcttggtctacagagagagtcccaagacagccagggctatgaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tctgagttcgaggccagcttggtctacagagagagtcccaagacagccagggctatgaaa 739
Query: 540 agaaaccctgtctcgaaacaaacaaacacaaacaaaaccttaggggggaaaaccatacag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agaaaccctgtctcgaaacaaacaaacacaaacaaaaccttaggggggaaaaccatacag 799
Query: 600 agagaaaaactttatgattgggttgttttctctttgttccaaaaacatctattttatttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agagaaaaactttatgattgggttgttttctctttgttccaaaaacatctattttatttt 859
Query: 660 atgtgtatgtgtgtgtg 676
|||||||||||||||||
Sbjct: 860 atgtgtatgtgtgtgtg 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_a12.g1 MSMg01no313_a12.g1 CHROMAT_FILE:
MSMg01no313_a12.g1 PHD_FILE: MSMg01no313_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:16 2005
(343 letters)
>mm_chr15_99730073_99730815
Length = 743
Score = 609 bits (315), Expect = e-179
Identities = 336/343 (97%)
Strand = Plus / Minus
Query: 1 agggtgagtgttagctcactggctgtctcctgggtagaaggagaaagggtagtgatgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agggtgagtgttagctcactggctgtctcctgggtagaaggagaaagggtagtgatgctt 484
Query: 61 aaagccaacaactgctgtgtaaggcagagcaaattcaagggcgagcatgataatatcagc 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 483 aaagccaacaactgctgtgtaaggcagagcaaattcaagggtgagcatgataatatcagc 424
Query: 121 aaaagctgcgtggtaggggacgcagaggaatgggaggcttcaagttctcatggtcatata 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 423 aaaagctgtgtggtaggggacgcagaggaatgggaggcttcaagttctcatggtcatgta 364
Query: 181 agaaagagagcgggaggtgttactggaacaccctggcaaaggtgatcgttaagagcagag 240
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 363 agaaagagagtgggaggtgttactggaacaccctggcaaaggtgatccttaagagcagag 304
Query: 241 tatggatttccatgagaagtgggagaaatatggctgggagtgttctgagagagagactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tatggatttccatgagaagtgggagaaatatggctgggagtgttctgagagagagactgc 244
Query: 301 ttatctcgacagtgtagcaatgaggagggaaacgagagaaaca 343
| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 243 tcatctcgacagcgtagcaatgaggagggaaacgagagaaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
