Query= MSMg01no313_l13.b1 MSMg01no313_l13.b1 CHROMAT_FILE:
MSMg01no313_l13.b1 PHD_FILE: MSMg01no313_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:45 2005
(413 letters)
>mm_chr15_32047766_32048578
Length = 813
Score = 731 bits (378), Expect = 0.0
Identities = 399/406 (98%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 9 ggaattcagaagcatgtggttttctgtcaataagcctttttaaagttttcacacaagtgt 68
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattcagaagcacgtggttttctgtcaataagcctttttaaagttttcacacaagtgt 268
Query: 69 aaccctgcaacctatgactggaagtctctaactttgacaggctttgaaagagcttgtcac 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaccctgcaacctatgactggaagtctctaactttgacaggctttgaaagagcttgtcac 328
Query: 129 tctacttttaaagaactgctggttaggaacaaagggaagcctgagctaccactgagagat 188
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 329 tctacttttaaagaactgctggttaggaacaaagggaagcctgaactaccactgagagat 388
Query: 189 cgtgttcatgtgcatggcctacactgtggagaggccatgcctgtgtgcatgtccatattg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cgtgttcatgtgcatggcctacactgtggagaggccatgcctgtgtgcatgtccatattg 448
Query: 249 atgcctgtggtctgtgctgccaccagggacatgtttgggtacatgactttgctacaccca 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atgcctgtggtctgtgctgccaccagggacatgtttgggtacatgactttgctacacctg 508
Query: 309 ggagcttattgatttccatggtggcccaggagttccacgaaaggccatgcacg-tgtcca 367
||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 509 ggagcttattgatttccatggtggcccaggagttccacgaaaggccatgca-gatggcca 567
Query: 368 tagtctgtgctgctgtggcctatactgctatcagagaccatgctga 413
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tagtctgtgctgctgtggcctatactgctatcagagaccatgctga 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_l13.g1 MSMg01no313_l13.g1 CHROMAT_FILE:
MSMg01no313_l13.g1 PHD_FILE: MSMg01no313_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:45 2005
(329 letters)
>mm_chr15_32199089_32199817
Length = 729
Score = 580 bits (300), Expect = e-170
Identities = 321/328 (97%)
Strand = Plus / Minus
Query: 1 ctgggggctgggaggtgaggatttcagagtgaactcctaaagaaagcaaagagccccccc 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||
Sbjct: 499 ctgggggctgggaggtgaggatttcagagtgatctcctaaagaaagcaaagagcaacacc 440
Query: 61 ttgattttgaacttctgacatccaaaactgagagaactgatcactgctgctttcaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttgattttgaacttctgacatccaaaactgagagaactgatcactgctgctttcaaagga 380
Query: 121 ttccaaatgtggagtgatttgttcagtagcctagggaaagaaacacaaatgttacagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttccaaatgtggagtgatttgttcagtagcctagggaaagaaacacaaatgttacagata 320
Query: 181 gccatataaaataaccaaaaagttttggtcagactaaaagaaattttcatgttctcaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gccatataaaataaccaaaaagttttggtcagactaaaagaaattttcatgttctcaact 260
Query: 241 attatcaatacagttacaaacaaataaacatgatcattttgtcagctacatgctaagcat 300
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 259 attatcaatacagttacaaacaaatacacatgaacattttgtcagctacatgctaagcat 200
Query: 301 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 328
| ||||||||||||||||||||||||||
Sbjct: 199 gcgtgtgtgtgtgtgtgtgtgtgtgtgt 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
