Query= MSMg01no313_o07.b1 MSMg01no313_o07.b1 CHROMAT_FILE:
MSMg01no313_o07.b1 PHD_FILE: MSMg01no313_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:07 2005
(420 letters)
>mm_chr15_75549020_75549841
Length = 822
Score = 723 bits (374), Expect = 0.0
Identities = 393/400 (98%), Gaps = 2/400 (0%)
Strand = Plus / Plus
Query: 21 cagcccccctgttgtgggaatccagactggactgtggactgtaggctggggctgtggggg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cagcccccctgttgtgggaatccagactggactgtggactgtaggctggggctgtggggg 280
Query: 81 agctgagcaagacgcctcacaaatccgaggtcccatccttcatgaaggggtctccgcctc 140
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 281 agctgagcaagaggcctcacaaatccgaggtcccatccttcatgaaggggtctccaactc 340
Query: 141 agctctcctcacgatggtgtctcagggcttgcctgtcaccccagaagccctaggaggcct 200
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 341 agctctcctcacgatggtgtctcagggctttcctgtcaccccagaagccctaggaggcct 400
Query: 201 gtggccaaggcctaccccgac--agagggtctacagcaacctgggctggctactgttctg 258
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 401 gtggccaaggcctaccccgacagagagggtctacagcagcctgggctggctactgttctg 460
Query: 259 tgtgtccaccttggggtggcccaggctccatgcccatgcataatgcagtatttacctggg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgtgtccaccttggggtggcccaggctccatgcccatgcataatgcagtatttacctggg 520
Query: 319 gggtgattggcagctgctctgacttcccctccccccgcagccccagacgttgagccagac 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gggtgattggcagctgctctgacttcccctccccccgcagccccagacgttgagccagac 580
Query: 379 gtgcattaaggcggggagtgacttatcgagctgtcagggg 418
||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtgcattaaggcggggagtgacttatcgagctgtcagggg 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 822
Length adjustment: 9
Effective length of query: 411
Effective length of database: 813
Effective search space: 334143
Effective search space used: 334143
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_o07.g1 MSMg01no313_o07.g1 CHROMAT_FILE:
MSMg01no313_o07.g1 PHD_FILE: MSMg01no313_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:07 2005
(389 letters)
>mm_chr15_75624258_75625046
Length = 789
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%)
Strand = Plus / Minus
Query: 1 ataaggtaaagtcctgatcctcatgtgaccaaatttggagaagaggtctctggccgcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 787 ataaggtaaagtcctgatcctcatgtgaccaaatttggagaagaggtctctgggtgtgag 728
Query: 61 taaaattaatgggggtcatacatgttcagctctaatccagtcctaccggtgccatataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 taaaattaatgggggtcatacatgttcagctctaatccagtcctaccggtgccatataag 668
Query: 121 aaaaggaagcgacacaggtgcacaccttgagaaaagccaggtgaggacagtgggaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaaaggaagcgacacaggtgcacaccttgagaaaagccaggtgaggacagtgggaaagaa 608
Query: 181 ccttctagagccagggagggtgacctcccctgagagtagtccatagcccctggggctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ccttctagagccagggagggtgacctcccctgagagtagtccatagcccctggggctggg 548
Query: 241 cctcttggcctcaggaggaagcatgtttctgttgttgaagcaaccatgctgcagcatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cctcttggcctcaggaggaagcatgtttctgttgttgaagcaaccatgctgcagcatcct 488
Query: 301 gtggggtaacctttgacaggcaccttaccactcactggccctcaggttgtccaggatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtggggtaacctttgacaggcaccttaccactcactggccctcaggttgtccaggatgct 428
Query: 361 gcgtgtggtactcgctttct 380
||||||||||||||||||||
Sbjct: 427 gcgtgtggtactcgctttct 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
