Query= MSMg01no315_i16.b1 MSMg01no315_i16.b1 CHROMAT_FILE:
MSMg01no315_i16.b1 PHD_FILE: MSMg01no315_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:02 2005
(686 letters)
>mm_chr15_40760075_40761160
Length = 1086
Score = 1266 bits (655), Expect = 0.0
Identities = 676/683 (98%)
Strand = Plus / Minus
Query: 4 ggaattcttttgcctctgcatgtccagcactatgattacaggtgcatgctgctgtactta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ggaattcttttgcctctgcatgtccagcactatgattacaggtgcatgctgctgtactta 701
Query: 64 gttgtatataggtactgaagattcaaacacaagtcttcaagcttacgtaacaagcacatt 123
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 700 gttgtatataggtactgaagattcaaactcaagtcttcaagctttcgtaacaagcacatt 641
Query: 124 accgcttaagtcatctcctcaactctgcgtttaaaagaaattttaaaaactttatactta 183
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 640 accacttaagtcatctcctcaactctgcttttaaaagaaattttaaaaactttatactta 581
Query: 184 gaaggctctgcagcaaagaagatcttgcagcagcaagaaaacggggcatggttctgaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaaggctctgcagcaaagaagatcttgcagcagcaagaaaacggggcatggttctgaatg 521
Query: 244 aaacctaggagtggaaggtgaagatctgtagccatattattaaagacagagtgagcatga 303
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 520 aaacctaggagtggaaggcgaagatctgtagccttattattaaagacagagtgagcatga 461
Query: 304 aattcagatttcccaagaaggaagactctgtcatactttaacataaaagagaatcacgtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aattcagatttcccaagaaggaagactctgtcatactttaacataaaagagaatcacgtg 401
Query: 364 gccacagctgaacaggcaagccagagaatagagttgggcctaaaatacccaaattttgga 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gccacagctgaagaggcaagccagagaatagagttgggcctaaaatacccaaattttgga 341
Query: 424 ggatcttttcaactatgcaaagagctttgagatttactctatatgagatcaaacttctgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggatcttttcaactatgcaaagagctttgagatttactctatatgagatcaaacttctgg 281
Query: 484 atagtccggggcacaacaggctttgagttagatgtgagcatgccattctggctgccatgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atagtccggggcacaacaggctttgagttagatgtgagcatgccattctggctgccatgt 221
Query: 544 gatcagggacctcaatgagaggtgaatgaaccaagggaaatcagctaagaggctgttggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gatcagggacctcaatgagaggtgaatgaaccaagggaaatcagctaagaggctgttggt 161
Query: 604 gagaaatggtgcagtcgttagtgggaggtgatgagagatgaaggtaaagtttgttgtccc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gagaaatggtgcagtcgttagtgggaggtgatgagagatgaaggtaaagtttgttgtccc 101
Query: 664 attgaatgtaacattgctgaaca 686
|||||||||||||||||||||||
Sbjct: 100 attgaatgtaacattgctgaaca 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_i16.g1 MSMg01no315_i16.g1 CHROMAT_FILE:
MSMg01no315_i16.g1 PHD_FILE: MSMg01no315_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:02 2005
(669 letters)
>mm_chr15_40730411_40731479
Length = 1069
Score = 1228 bits (635), Expect = 0.0
Identities = 656/669 (98%), Gaps = 11/669 (1%)
Strand = Plus / Plus
Query: 1 tcatcagacagaattacatcttgtatggttattaaatatatctgaatcctatccatcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcagacagaattacatcttgtatggttattaaatatatctgaatcctatccatcact 260
Query: 61 tttatctattgctttaaacgaaccacatggatggaagcatgcacacacatacataatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatctattgctttaaacgaaccacatggatggaagcatgcacacacatacataatgaa 320
Query: 121 tatttttaatattttaagcatgcaaaatgtaatatgctaataattgtactttactgtttt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttt---------aagcatgcaaaatgtaatatgctaataattgtactttactgtttt 371
Query: 181 tatcctttcttaaacaaaatagtctcacaaaaaatacctcagttgttgaaagatatacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tatcctttcttaaacaaaatagtctcacaaaaaatacctcagttgttgaaagatatacaa 431
Query: 241 acgttcagtatttcctgtcacaagttaacaatataatgaaaagcaatattttgatatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acgttcagtatttcctgtcacaagttaacaatataatgaaaagcaatattttgatatgtt 491
Query: 301 ttctgataattgttttagcctacagcccaaggaaatacaccgaagttatcataaactata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttctgataattgttttagcctacagcccaaggaaatacaccgaagttatcataaactata 551
Query: 361 gtaggtgcactaaaatgtaagcttaaacaaatgtagagaaattagacacataaacatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtaggtgcactaaaatgtaagcttaaacaaatgtagagaaattagacacataaacatgtt 611
Query: 421 ggacaaaaaggtgtttataggtgacagagagatcactcagctgttaagaaagctttcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggacaaaaaggtgtttataggtgacagagagatcactcagctgttaagaaagctttcaga 671
Query: 481 tttgttcccagtacccacccacactgggcacatgaaaaacatctgtaactccagctacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tttgttcccagtacccacccacactgggcacatgaaaaacatctgtaactccagctacga 731
Query: 541 aggatctctccctatcttctggacacacacacacacacacgcacacgcacacacacacgc 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 732 aggatctctccctatcttctggacacacacacacacacacgcacatgcacacacat--gc 789
Query: 601 acacactcatatgggtgtgcacatattcacatatactcaaactctaatacataaaacatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 acacactcatatgggtgtgcacatattcacatatactcaaactctaatacataaaacatt 849
Query: 661 gtccatagt 669
|||||||||
Sbjct: 850 gtccatagt 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
