Query= MSMg01no316_h14.b1 MSMg01no316_h14.b1 CHROMAT_FILE:
MSMg01no316_h14.b1 PHD_FILE: MSMg01no316_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:14 2005
(685 letters)
>mm_chr15_59972891_59973976
Length = 1086
Score = 1265 bits (654), Expect = 0.0
Identities = 672/678 (99%), Gaps = 1/678 (0%)
Strand = Plus / Minus
Query: 9 tcttcaagttttccttaaaggaaattagataaatagaaaagtcacttattcaattttctg 68
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tcttcaagttgtccttaaaggaaattagataaatagaaaagtcacttattcaattttctg 1027
Query: 69 tcatttttcatctaatagagacataatatttataaacagtcaattcattggcagaaatta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 tcatttttcatctaatagagacataatatttataaacagtcaattcattggcagaaatta 967
Query: 129 ctatatgaccataagataaataaaatccatcattgaaactaaactgaaaattaaaaaaaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ctatatgaccataagataaataaaatccatcattgaaactaaactgaaaattaaaaaaaa 907
Query: 189 tatatatatatatatatataccttacctgctgtcaacaaaacagagcctcgaatacagga 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 aatatatatatatatatataccttacctgctgtcaacaaaacagagcctcgaatacagga 847
Query: 249 tcaggacctagactcaccagtttgtgccatgtatttttggtagaaacagagccctcaagc 308
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 846 tcaggacctagactcaccagtttgtgccagggatttttggtagaaacagagccctcaagc 787
Query: 309 tccaggcagccttcttacccagtggaagacgtgagtaactgagggcaaggtccgtatcct 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tccaggcagccttcttacccagtggaagacgtgagtaactgagggcaaggtccgtatcct 727
Query: 369 gagttacagcaccacctgctaaagccaaaccagaaaacattactcacactattgcaagca 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gagttacagcaccacctgctaaagccaaaccagaaaacattactcacactattgcaagca 667
Query: 429 cgacttgctaaagtcgtaggaaataaatgaagataggagcattactcacactgttgcaag 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cgacttgctaaagtcgtaggaaataaatgaagataggagcattactcacactgttgcaag 607
Query: 489 agggaaaccacctctgagatgcggctcactaactgatggactgcacaggtctgcaggagc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agggaaaccacctctgagatgcggctcactaactgatggactgcacaggtctgcaggagc 547
Query: 549 -tttatatgatcaagagcacagcagttacttacatgtggtttgtggttactgtgagcacc 607
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 546 ttttatatgatcaagagcacagcagttacttagatgtggtttgtggttactgtgagcacc 487
Query: 608 cacccaactttttccagctagcggatgaacaggaaatgtttgtcttacaaaaatgaccaa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cacccaactttttccagctagcggatgaacaggaaatgtttgtcttacaaaaatgaccaa 427
Query: 668 agtgttgatgagacagga 685
||||||||||||||||||
Sbjct: 426 agtgttgatgagacagga 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1086
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1076
Effective search space: 726300
Effective search space used: 726300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_h14.g1 MSMg01no316_h14.g1 CHROMAT_FILE:
MSMg01no316_h14.g1 PHD_FILE: MSMg01no316_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:14 2005
(592 letters)
>mm_chr15_59914091_59915082
Length = 992
Score = 934 bits (483), Expect = 0.0
Identities = 584/665 (87%), Gaps = 73/665 (10%)
Strand = Plus / Plus
Query: 1 cttacaatgtatggactttataggattgccattctttaaacctatgatcttggttacttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cttacaatgtatggactttataggattgccattctttaaacctatgattttggttacttc 260
Query: 61 aacttctttgaatttcagtttttcatcttgaagtcagaaagaataaagttgtgtatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttctttgaatttcagtttttcatcttgaagtcagaaagaataaagttgtgtatacaa 320
Query: 121 ctcagtgtgttctggggcagagtaaagaagacagcaatggcaaactctctagtacactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcagtgtgttctggggcagagtaaagaagacagcaatggcaaactctctagtacactta 380
Query: 181 aaaaaaa-gatttatttatttattatatgtaagtatactgtagctgtcttcagacactcc 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaaaagatttatttatttattatatgtaagtatactgtagctgtcttcagacactcc 440
Query: 240 agaagagggagtcagatctcgttacggatggttgtgagccaccatgtggtttctaggatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 441 agaagagggagtcagatctcgttacggatggttgtgagccaccatgtggttgctgggatt 500
Query: 300 tgaactctggaccttcagaagagcagtccggtgctcttactcactgagccctctcaccag 359
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 501 tgaactctggaccttcagaagagcagtcctgtgctcttactcactgagccatctcaccag 560
Query: 360 cccaaaaggtattttatgctattcatgactatttttttttttt----------------- 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccaaaaggtattttatgctattcatgactattttttttttttggtttttctagacaggg 620
Query: 403 -------------------------------------------------------tgtgt 407
|||||
Sbjct: 621 ttttttttttttttttttttttttttttttttttttgtgtgtgtgtgtgtgtgtgtgtgt 680
Query: 408 gtgtgtgtagccctgactgtcctggaactcactctgtagaccaggctggccttgaactca 467
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtgtgtagctctgactgtcctggaactcactctgtagaccaggctggccttgaactca 740
Query: 468 gaaatctgcctgcctctgcctcccaagtgctggagttaaaggcgtgcggcaccacgcccg 527
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 741 gaaatctgcctgcctctgcctcccaagtgctggagttaaaggtgtgcggcaccacgcccg 800
Query: 528 gtgcttctagtatacttttatatagacagagtccttagtacatcttaaacttccttacat 587
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcgcttctagtatacttttatatagacagagtccttagtacatcttaaacttccttacat 860
Query: 588 ctgta 592
|||||
Sbjct: 861 ctgta 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
