XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAA
CTGAGTAACACCAAATGGCTCAGAAGCACCTGTAAAAATGTTCAGCATCT
TAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACA
CCAGTCAGAATGGCTAAGATCAATAATTCAGGTGACAGCAGATGCTGGCG
AGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC
TTGTACAACCACTCTGGAAATCAGTCTAGCGGTTCCTCAGAAAATTGGAC
ATAGCACTACTGGAGGATCCCACAATACCTCTCCTTGGCATATATCCAGA
AGATGTTCCTCTTTCTTTCATCTTAAGGATGCTGAACATTTTTTCAGGTG
CTTCTCAGTCATCGCCATTCCTCAGGTGAGAATTCTTTGTTTAGCTCTGA
GCCCCATTTTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAG
TTCTTTATATATATTGGATATTAGTTCCCTCTCTGATTTAGGATAGGTAA
AGATCCTTTCCCAATCTGTTGGTGGCCTCTTTGTTACTGACAGTGTCTTT
TGCCTTACAGAAGCTTTGCAATTTCATGAGGTCCCATTTGTCAGTTCTTG
ATCTTACAGCACAAGCCATTGCTGTTCTGATAAGGAAGTGAAAGATCTGT
ATGATAAGAACTTCAAGTCTCTGAATGAAGAATTAAAN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAAACTATTAAAATAAGTTAAATTATATGTTTTTA
TTCAACTCTCAGATTGACCCATGCTCTATTTATTGCTAATATTTCATCAA
TAAATTGGAAAATTTAACAACTTAAATTTTAAAATTTTTAAAGATTTTAT
TTCACAGCTTATGAAGGACTCTACCATGCACACTAGCAAAAAAAGAAAAA
AAAATTGAAAAAAAGAAACCTGAGAATGAATGCCTGTCAAATAAATTAGT
AATTACCTCTGTGAATATGATTTATTTATTCAGTAGTATTTGCTAATTTA
GCATTATGAGGTGGTACAATACCTCTCTATGATAATCACATTGCATAATC
TCAGCTGAAGACCACCCCACCTTTGAACTTTCACTTTTTCGCCTATTGGT
CCATTATATTTACATTTTGGGTTTATATAAATGGGGTTTGATTTGTTTTT
AGATAGAGTCTTACTACACAGTTGAGACTTGCCTCAAGTTCATAGCAATT
TTGTTTCAATGTTTCAGTTGATAGGATTATAAGTATGAGCTACTCTGTTG
CATTGTCTAGATGTATAGAAAACATATACAGTGTTTATATATATATATAT
ATATAAAACGAAACAGGCATGGGAGGAAATATGGAGACAAAGTATGGAGG
AGAGACTGAAGGAAAGGAAAGGTTATCTAGAGACTGACCN

Query= MSMg01no318_a19.g1 MSMg01no318_a19.g1 CHROMAT_FILE:
MSMg01no318_a19.g1 PHD_FILE: MSMg01no318_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:09 2005
         (673 letters)



>mm_chr15_16651869_16652941
          Length = 1073

 Score = 1181 bits (611), Expect = 0.0
 Identities = 664/699 (94%), Gaps = 30/699 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaactattaaaataagttaaattatatgtttttattcaactctcagattgacccatgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 caaactattaaaataagttaaattatatgtttttattcaactctcagattgacccatgct 843

                                                                       
Query: 61  ctatttattgctaatatttcatcaataaattggaaaatttaacaacttaaattttaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctatttattgctaatatttcatcaataaattggaaaatttaacaacttaaattttaaaat 783

                                                                       
Query: 121 ttttaaagattttatttcacagcttatgaaggactctaccatgcacactagcaaaaaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttttaaagattttatttcacagcttatgaaggactctaccatgcacactagcaaaaaaag 723

                                                                       
Query: 181 aaaaaaaaattgaaaaaaagaaacctgagaatgaatgcctgtcaaataaattagtaatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaaaaaaaattgaaaaaaagaaacctgagaatgaatgcctgtcaaataaattagtaatta 663

                                                                       
Query: 241 cctctgtgaatatgatttatttattcagtagtatttgctaatttagcattatgaggtggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctctgtgaatatgatttatttattcagtagtatttgctaatttagcattatgaggtggt 603

                                                                       
Query: 301 acaatacctctctatgataatcacattgcataatctcagctgaagacca----ccccacc 356
           |||||||||||||||||||||||||||||||||||||||||||||| ||        | |
Sbjct: 602 acaatacctctctatgataatcacattgcataatctcagctgaagatcatttt----agc 547

                                                                       
Query: 357 tttgaactttcactttttcgcctattggtccattatatttacattttgggtttatataaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 546 tttgaactttcactttttcgcctattggtccattatatttacattttggttttatataaa 487

                                                                       
Query: 417 tggggtttgatttgtttttagatagagtcttactacacagttgagacttgcctcaagttc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tggggtttgatttgtttttagatagagtcttactacacagttgagacttgcctcaagttc 427

                                                                       
Query: 477 atagcaattttgtttcaatgtttcagttgataggattataagtatgagctactctgttgc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atagcaattttgtttcaatgtttcagttgataggattataagtatgagctactctgttgc 367

                                                                       
Query: 537 attgtctagatgtatagaaaacatatacagtgt---------------------t-tata 574
           ||||||||||||||||||||||||||||| |||                     | ||||
Sbjct: 366 attgtctagatgtatagaaaacatatacattgtatatatatatatatatatatatatata 307

                                                                       
Query: 575 tatatatatatatataaaacgaaacaggcatgggaggaaatatggagacaaagtatggag 634
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tatatatatatatatataacgaaacaggcatgggaggaaatatggagacaaagtatggag 247

                                                  
Query: 635 gagagactgaaggaaaggaaaggttatctagagactgac 673
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gagagactgaaggaaaggaaaggttatctagagactgac 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)