Query= MSMg01no318_h14.b1 MSMg01no318_h14.b1 CHROMAT_FILE:
MSMg01no318_h14.b1 PHD_FILE: MSMg01no318_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:39 2005
(344 letters)
>mm_chr15_88717625_88718365
Length = 741
Score = 629 bits (325), Expect = 0.0
Identities = 336/341 (98%), Gaps = 3/341 (0%)
Strand = Plus / Minus
Query: 1 acagaaatattcaaatttttgcttcttatctatatgtaagcactgtcaacatgtgcttaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 538 acagaaatattcaaatttttgcttcttatccatatgtaagcactgtcaacatgtgcttaa 479
Query: 61 ttttttaaaaaaatatcatttgctcagtaccaaattggctcttaagtaagtgctcgtgta 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttttttaaaaaaat---atttgctcagtaccaaattggctcttaagtaagtgctcgtgta 422
Query: 121 aactaaagttttacattggctcagctctctcttagctcatagtaaaactaaaatttctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactaaagttttacattggctcagctctctcttagctcatagtaaaactaaaatttctaa 362
Query: 181 gggaaaaacaagagtcctaagcccagctgccccagcagactgagccagcttagccacccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggaaaaacaagagtcctaagcccagctgccccagcagactgagccagcttagccacccc 302
Query: 241 cacctgtctagtctatcaattcaaatagcaaagtaagtgagaaaaaggaagacattaagt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 cacctgtctagtctatcaattcaaatagcaaagtaagtgagaaaaaggaagacattaaat 242
Query: 301 ctacataagcaccttgggaacacaagcagaggtggctaatt 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctacataagcaccttgggaacacaagcagaggtggctaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 741
Length adjustment: 9
Effective length of query: 335
Effective length of database: 732
Effective search space: 245220
Effective search space used: 245220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_h14.g1 MSMg01no318_h14.g1 CHROMAT_FILE:
MSMg01no318_h14.g1 PHD_FILE: MSMg01no318_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:40 2005
(337 letters)
>mm_chr15_88564659_88565396
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 331/338 (97%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 ctgggggagacaggctagggttcctgaggatgaaggactgctgctgtaagagaagggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggggagacaggctagggttcctgaggatgaaggactgctgctgtaagagaagggtaa 260
Query: 61 ccagatgaatggtgtttactatggggtcaatggcactgagtagagcaagaatgctgaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagatgaatggtgtttactatggggtcaatggcactgagtagagcaagaatgctgaccc 320
Query: 121 tagagagccaggtggagtttcctgagagtgcttgctttccaagggagtggtattttgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagagccaggtggagtttcctgagagtgcttgctttccaagggagtggtattttgaga 380
Query: 181 gaatcaagagatgcatcctaagggggg-aagtggggttctgatagtgtctggtgaccagc 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcaagagatgcatcctaagggggggaagtggggttctgatagtgtctggtgaccagc 440
Query: 240 gtggttcacggtttatgagttaggagggaatggaaatgagggccgtgatggaggggatca 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggttcacggaggatgagttaggagggaatggaaatgagggccgtgatggaggggatca 500
Query: 300 ccaaacaagggtggatccctttgaggaataaatggcta 337
|||||||||||||||| |||||||||||||||||||
Sbjct: 501 ccaaacaagggtggatttatttgaggaataaatggcta 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
