Query= MSMg01no319_b12.b1 MSMg01no319_b12.b1 CHROMAT_FILE:
MSMg01no319_b12.b1 PHD_FILE: MSMg01no319_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:23 2005
(286 letters)
>mm_chr15_10346619_10347304
Length = 686
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Plus
Query: 1 tcacagtgttttaagttgcttgcttgtatatatttctcttcccctttacccaactctagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tcacagtgttttaagttgcttgcttgtatatatttctcttcccctttaccaaactctagg 260
Query: 61 ttattggtagggtattcatcttagcctcaagtatttagtgcatgggtacacagtgtaaaa 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattggtagggtagtcatcttagcctcaagtatttagtgcatgggtacacagtgtaaaa 320
Query: 121 caaaacctataacccaaaagtgctgtgcctattttgtctatagatactcaaggcaataat 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacctataacccaaaagtgctgtgtctattttgtctatagatactcaaggcaataat 380
Query: 181 ggactcatctgaaataaaagatgagccatatgataaagtcttctgtttgcatgtgtttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggactcatctgaaataaaagatgagccatatgataaagtcttctgtttgcatgtgtttat 440
Query: 241 aaatacatatttaaatataaatattatgtcattcataaacatcaca 286
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 aaatacatatttaaatataaatattatgtcattcataaatatcaca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_b12.g1 MSMg01no319_b12.g1 CHROMAT_FILE:
MSMg01no319_b12.g1 PHD_FILE: MSMg01no319_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:23 2005
(344 letters)
>mm_chr15_10563007_10563754
Length = 748
Score = 613 bits (317), Expect = e-180
Identities = 335/343 (97%), Gaps = 4/343 (1%)
Strand = Plus / Minus
Query: 4 tcctcaattgcactgac----tgatgtgcactaagttggtcagagacactttttgtggat 59
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcctcaattgcactgactgtttgatgtgcactaagttggtcagagacactttttgtggat 487
Query: 60 agagtcagtagtctgaacagctcagagaattgaggcctggtacacaggccagaaggaaga 119
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 486 agagtcagtagtctgaacagctcagagaattgaggcctggtatacaggccaaaaggaaga 427
Query: 120 actcatgtttaagcccttggtaaccttgaactgtcggccagtttggtttggtttcaccgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actcatgtttaagcccttggtaaccttgaactgtcggccagtttggtttggtttcaccgt 367
Query: 180 gcccttgagtgaaccgtgcactaggtcaaaggcctgcgttctcaggcaccgttctcaggc 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcccttgagtgaactgtgcactaggtcaaaggcctgcgttctcaggcaccgttctcaggc 307
Query: 240 accagctgtcaaggttagctagccattagctaatgagtaagctgaccccatagtcctacg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 accagctgtcaaggttagctagccattagctaatgagtaagctgaccccatagtcctaca 247
Query: 300 ttgcttcatcttctgaagggtacctgaaggaagtgaccctttg 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgcttcatcttctgaagggtacctgaaggaagtgaccctttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 748
Length adjustment: 9
Effective length of query: 335
Effective length of database: 739
Effective search space: 247565
Effective search space used: 247565
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
