Query= MSMg01no320_d20.b1 MSMg01no320_d20.b1 CHROMAT_FILE:
MSMg01no320_d20.b1 PHD_FILE: MSMg01no320_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:43 2005
(227 letters)
>mm_chr15_71121360_71121986
Length = 627
Score = 383 bits (198), Expect = e-111
Identities = 219/226 (96%)
Strand = Plus / Plus
Query: 1 cctggttaccataagtcttttattctgctcagatgtcaacacctgtcctcttatcaaatg 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 201 cctggttaccataagtcttttattctgctcagatgtcaacagctgtcctcttattaaatg 260
Query: 61 gctcccaagtgaaatatttaatcacaattcactagatatgtaaataatgcaatcagtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tctcccaagtgaaatatttaatcacaattcactagatatgtaaataatgcaatctgtaga 320
Query: 121 taagaaacatgtacatgagagagactgcctaacttgtaggtctgaagaattaggaatgta 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 321 taagaaacatgtacatgagagagattgcctaaattgtaggtctgaagaattaggaatgta 380
Query: 181 agctagcacaggaagctaaatgttagtgagttgtgtttgacttaat 226
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 agctagcacaggaagctaaatgtcagtgagttgtgtttgacttaat 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_d20.g1 MSMg01no320_d20.g1 CHROMAT_FILE:
MSMg01no320_d20.g1 PHD_FILE: MSMg01no320_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:43 2005
(225 letters)
>mm_chr15_71224838_71225463
Length = 626
Score = 398 bits (206), Expect = e-115
Identities = 221/226 (97%), Gaps = 1/226 (0%)
Strand = Plus / Minus
Query: 1 gtgaacagtacaatctagttctgttgatttgcaccccaccttttttt-tgtgtgtgcatt 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 341 gtgaacagtacaatctagttctgttgatttgcaccccacctttttttgtgtgtgtgcatt 282
Query: 60 catgtctttgggggaacagaatcccaggtggtctgtacatgcctacatggtgctttgtaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 281 catgtctttgggggaacagaatcccaggtggtctgtacatgcctacatggtgctttgcaa 222
Query: 120 aaagaattaaatattctagctagcctgtataaaagacacccaatccaggtattttattta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaagaattaaatattctagctagcctgtataaaagacacccaatccaggtattttattta 162
Query: 180 caagctgcatttcttgattgggtgggttttggagctattctaactt 225
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 161 caagctgcaaaccttgattgggtgggttttggagctattctaactt 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 626
Length adjustment: 9
Effective length of query: 216
Effective length of database: 617
Effective search space: 133272
Effective search space used: 133272
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
