Query= MSMg01no320_p11.b1 MSMg01no320_p11.b1 CHROMAT_FILE:
MSMg01no320_p11.b1 PHD_FILE: MSMg01no320_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:36 2005
(232 letters)
>mm_chr15_99316817_99317448
Length = 632
Score = 348 bits (180), Expect = e-100
Identities = 201/210 (95%), Gaps = 4/210 (1%)
Strand = Plus / Plus
Query: 20 gtgtgtgtgtgtgcgtgtgcgcgtgcgcgtgtgcgtgtgtacaagtgtgtgcacatgcat 79
||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 224 gtgtgtgtgtgtgtgtgt----gtgtgcgtgtgcgtgtgtacaagtgtgtgcacatgcat 279
Query: 80 gtggagattggagaccaccctcaggtgctgcctaccttggcttcttttagattgttttat 139
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 280 gtggagattggagaccaccctcaggtgctgcctacattggtttcttttagattgttttat 339
Query: 140 gcttagggatattttacctgtatgtgtgtctatgcaccacatgcatgcctgttagctgta 199
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 340 gcttagggatattttacctgtatgtgtgtctatgcaccacatgcatgcctggtagctgta 399
Query: 200 tcattagaggcaagaagagggcattgaatc 229
||||||||||||||||||||||||||||||
Sbjct: 400 tcattagaggcaagaagagggcattgaatc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_p11.g1 MSMg01no320_p11.g1 CHROMAT_FILE:
MSMg01no320_p11.g1 PHD_FILE: MSMg01no320_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:36 2005
(229 letters)
>mm_chr15_99504909_99505537
Length = 629
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%)
Strand = Plus / Minus
Query: 1 tacacaaacaagtgggttcctgctgcctaaggtgaagaggaagcaagcaagttgaagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tacacaaacaagtgggttcctgctgcctaaggtgaagaggaagcaagcaagttgaagaga 370
Query: 61 aagtggtcaggggggcaagagaggtactgagagcggagagttaggaaggaggttctgagg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aagtggtcagtggggcaagagaggtactgagagcggagagttaggaaggaggttctgagg 310
Query: 121 agcaatcccaacaatggaaatgacatggggacttcagggtcagcaatactggtgataaga 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 309 agcaatcccaacaatggaaatgacatagggacttcagggtcagcaatactggtgataaga 250
Query: 181 acacagtacatcggtacctaaggagacgtgggttctaatcctggatctg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acacagtacatcggtacctaaggagacgtgggttctaatcctggatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
