Query= MSMg01no321_g02.b1 MSMg01no321_g02.b1 CHROMAT_FILE:
MSMg01no321_g02.b1 PHD_FILE: MSMg01no321_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(592 letters)
>mm_chr15_64495663_64496656
Length = 994
Score = 1069 bits (553), Expect = 0.0
Identities = 583/597 (97%), Gaps = 8/597 (1%)
Strand = Plus / Plus
Query: 1 attgttcttggaacgtgcttccatggccctcccagatgtagcaggttgggaggacttatc 60
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 201 attgttcttggaacgtgcttccatggccctcccagatgtaacagattgggaggacttatc 260
Query: 61 caggaccaatccaggcaatttgacatagaaattcacacagaaagttttctatgagagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaccaatccaggcaatttgacatagaaattcacacagaaagttttctatgagagaat 320
Query: 121 tagccttcttgggattagcataagctgctagggagatggggaaaaaactttaattagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagccttcttgggattagcataagctgctagggagatggggaaaaaactttaattagtga 380
Query: 181 gcaacttagcatggaaggaaaggagaaaatccagatttacactcagggttggaaaatata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gcaacttagcatggaaggaaaggagaaaatccagatttacactcagggttggaaaataga 440
Query: 241 tgattatgtaacctaacatttggaaaggtcaaggactgaatttttttttttccc-----a 295
||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 tgattatgtaagttaacatttggaaaggtcaaggactgaattttttttttt---ttgtaa 497
Query: 296 cccaaagcaattgccatattgttttctacatacatggctggtggcattttcctgagctgg 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gccaaagcaattgccatattgttttctacatacatggctggtggcattttcctgagctgg 557
Query: 356 agatactgctcaattctagtgtgatcctgtgcaataagctagcaatgaattggtgagact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agatactgctcaattctagtgtgatcctgtgcaataagctagcaatgaattggtgagact 617
Query: 416 tgttagtacctcgggaagatgtttccaactctcacttaacatagtgcttgacctatagca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgttagtacctcgggaagatgtttccaactctcacttaacatagtgcttgacctatagca 677
Query: 476 agctctcagcacaggatgtctgtgatgctactgctgtgcttagcttagttaagtgctgca 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agctctcagcacaggatgtctgtgatgctactgctgtgcttagcttagttaagtgctgca 737
Query: 536 cgttgaatgtctttgtgctgcatccttgtctccccttctcagagatgctccagtacc 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cgttgaatgtctttgtgctgcatccttgtctccccttctcagagatgctccagtacc 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 994
Length adjustment: 10
Effective length of query: 582
Effective length of database: 984
Effective search space: 572688
Effective search space used: 572688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_g02.g1 MSMg01no321_g02.g1 CHROMAT_FILE:
MSMg01no321_g02.g1 PHD_FILE: MSMg01no321_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(643 letters)
>mm_chr15_64686523_64687565
Length = 1043
Score = 1218 bits (630), Expect = 0.0
Identities = 639/642 (99%)
Strand = Plus / Minus
Query: 1 aacatggaacggatcatgaggagacagaagctgcagagggagtaagacatccacagagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aacatggaacggatcatgaggagacagaagctgcagagggagtaagacatccacagagac 783
Query: 61 tactggcagccagaagaagccagtgacatcagcctgctcccagggaaccccaccccatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tactggcagccagaagaagccagtgacatcagcctgctcccagggaaccccaccccatgc 723
Query: 121 tagggtttgaattgggtcttttccccttgaatctcatgatgaagtttaagtttatattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tagggtttgaattgggtcttttccccttgaatctcatgatgaagtttaagtttatattat 663
Query: 181 aagtgattaagaggtagcaccaagtatggctttaagataacagtaaggctttctggacat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 662 aagtgattaagaggtagcaccaagtatggctttaagataacagtaaggctttctcgacat 603
Query: 241 taatcgattaatcaataatttcatgccatttctataaaactgattagtggattatctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taatcgattaatcaataatttcatgccatttctataaaactgattagtggattatctcaa 543
Query: 301 cagtatctctgctacaaagccactttggctaactctctttcctgctctcattctgtcacc 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 542 cagtatctctgctacaaagccactttggctaactctctttcctgttctcattctgtcacc 483
Query: 361 atagggtgatctatttcccttgggacgtgtgactttagaccttggtcacaggattatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atagggtgatctatttcccttgggacgtgtgactttagaccttggtcacaggattatatg 423
Query: 421 tagcatatcatacatctccaatgttcagtggcaagaaactgatctatgcagtactatgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tagcatatcatacatctccaatgttcagtggcaagaaactgatctatgcagtactatgta 363
Query: 481 ttttttcctttcataatatttactctggaatttaaacatgtagtaactctattaatgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 362 ttttttcctttcataatatttactctggaatttaaacatgtagtaactctattgatgagt 303
Query: 541 aaaatattgattgagtaaagactatctcccacaaaggttcttctccaaatatgtgaatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaatattgattgagtaaagactatctcccacaaaggttcttctccaaatatgtgaatat 243
Query: 601 ccttgatgagtatggaagactcattccatttcccttccctct 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccttgatgagtatggaagactcattccatttcccttccctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
