Query= MSMg01no323_m06.b1 MSMg01no323_m06.b1 CHROMAT_FILE:
MSMg01no323_m06.b1 PHD_FILE: MSMg01no323_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:41 2005
(714 letters)
>mm_chr15_81356871_81357984
Length = 1114
Score = 1122 bits (580), Expect = 0.0
Identities = 598/604 (99%)
Strand = Plus / Minus
Query: 1 atgaacctcagaatcaaacccagggcttcctgcaaaagctaggcgagcattccttgacat 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 604 atgaacctcagaatcaaacccagggctttgtgcaaaagctaggcgagcattccttgacat 545
Query: 61 cccaacgccccatgctcagtccattccattttctgttggacatgaatgttctaggaggtg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cccaacgctccatgctcagtccattccattttctgttggacatgaatgttctaggaggtg 485
Query: 121 ctacacagagctctctgttttgccacagtttttctgcccctgctgcagaacaattctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctacacagagctctctgttttgccacagtttttctgcccctgctgcagaacaattctagt 425
Query: 181 aggtgattggtgccaattgccccaatcccttagtcactaatcgaagagcaccagatattc 240
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 424 aggtgattggtgccaattgccccagtcccttagtcaccaatcgaagagcaccagatattc 365
Query: 241 agatcccaattcaatggaaccatgttgtgccacttgatattggtgaccactccacagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agatcccaattcaatggaaccatgttgtgccacttgatattggtgaccactccacagctg 305
Query: 301 gctgcaaagacttctcactagagctccaagttgtagtgccgtttcagccacaggagcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gctgcaaagacttctcactagagctccaagttgtagtgccgtttcagccacaggagcgac 245
Query: 361 tcctcttcccaaacctttgcatagcttcacagtggtaccttgttttgtttggtagtatgg 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcctcttcccgaacctttgcatagcttcacagtggtaccttgttttgtttggtagtatgg 185
Query: 421 aagactgaaccaatggccttgcagatgctgaacaaacacactctaccactgagcttcacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aagactgaaccaatggccttgcagatgctgaacaaacacactctaccactgagcttcacc 125
Query: 481 cccagccctagtgtgacatattgatggctgggttatagtctctactgtgttgtatataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cccagccctagtgtgacatattgatggctgggttatagtctctactgtgttgtatataac 65
Query: 541 aggggacatctttttcaatgccttccaccaaaactcctaaaacctgacagtagcaccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aggggacatctttttcaatgccttccaccaaaactcctaaaacctgacagtagcaccaaa 5
Query: 601 tctc 604
||||
Sbjct: 4 tctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1114
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1104
Effective search space: 777216
Effective search space used: 777216
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no323_m06.g1 MSMg01no323_m06.g1 CHROMAT_FILE:
MSMg01no323_m06.g1 PHD_FILE: MSMg01no323_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:41 2005
(660 letters)
>mm_chr15_81199885_81200944
Length = 1060
Score = 1185 bits (613), Expect = 0.0
Identities = 641/661 (96%), Gaps = 19/661 (2%)
Strand = Plus / Plus
Query: 1 tagcagtcttattactctgggaagttaaagcacaaatgcaacttacagtgttcgtatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcagtcttattactctgggaagttaaagcacaaatgcaacttacagtgttcgtatgct 260
Query: 61 tttacttatacaagctataaatcctcatttgttttgaaacttcaaaatgaaagggtaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacttatacaagctataaatcctcatttgttttgaaacttcaaaatgaaagggtaaga 320
Query: 121 cactgggtttgcaaggtgtggtggcacaaagctctgatcccagctctggggagggtggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgggtttgcaaggtgtggtggcacaaagctctgatcccagctctggggagggtggca 380
Query: 181 gatacatctctgagttcgaggccagcctgctttacatagtgagttctagaacagccaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatacatctctgagttcgaggccagcctgctttacatagtgagttctagaacagccaggg 440
Query: 241 ctacacagaacaaccctgtctcaaaaaaaaaaattttttaaaaattgttttaaaag-aaa 299
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 441 ctacacagaacaaccctgtctcaaaaaaaaaaa------aaaaattgttttaaaagaaaa 494
Query: 300 aaaaaaaatgaaagggcatacttaaattacttcttaggttcatctcctctacattctccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaaaaaaatgaaagggcatacttaaattacttcttaggttcatctcctctacattctccc 554
Query: 360 agcaaaatgtaaaacagcacagaaggaggcttcctgcgctggttttaagaataaaggccg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agcaaaatgtaaaacagcacagaaggaggcttcctgcgctggttttaagaataaaggccg 614
Query: 420 actagaactttctctcatactgttagaaacactcttggaggtggactgtgtcccagtaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 actagaactttctctcatactgttagaaacactcttggaggtggactgtgtcccagtaca 674
Query: 480 cagcactgacatagtgtgtgtgaggccccagttcaatccccaggacacatatgcatattt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cagcactgacatagtgtgtgtgaggccccagttcaatccccaggacacatatgcatattt 734
Query: 540 tttaaacggtaataagacacacacacacacacacacacacacacacacacacacatatat 599
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 735 tttaaacggtaataagacacacacacacacacacacacacaca------------tatat 782
Query: 600 atataaataaaatgatacttattaaatgacctccaaattatgacttactatttaattatg 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atataaataaaatgatgcttattaaatgacctccaaattatgacttactatttaattatg 842
Query: 660 t 660
|
Sbjct: 843 t 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
