Query= MSMg01no325_h10.b1 MSMg01no325_h10.b1 CHROMAT_FILE:
MSMg01no325_h10.b1 PHD_FILE: MSMg01no325_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:58 2005
(655 letters)
>mm_chr15_102685175_102686230
Length = 1056
Score = 1141 bits (590), Expect = 0.0
Identities = 631/654 (96%), Gaps = 17/654 (2%)
Strand = Plus / Minus
Query: 4 ggaattctccagatgtcccagaaggacacagagtatgcctttcttcgtattctgcatgct 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ggaattctccagatgtgccagaaggacacagagtatgcctttcttcgtattctgcatgct 812
Query: 64 tgcttcttcagctggccctgagatgggcttcagccagtcacacaaaatcgctctaaatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tgcttcttcagctggccctgagatgggcttcagccagtcacacaaaatcgctctaaatgt 752
Query: 124 gcaggcaaaggccacatgaccagcacagggtagagtatgctcccgcaactaaagcccagc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gcaggcaaaggccacatgaccagcacagggtagagtatgctcccgcaactaaa------- 699
Query: 184 attacgggtaggacgaccttctcagccacgtctgtgcacccccatcgtggttggaatttc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 -------gtaggacgaccttctcagccacgtctgtgcacccccatcgtggttggaatttc 646
Query: 244 ttctccctgcaacaagcattcaggacttactttagaatccagctctgtaaattctcagct 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 645 ttctccctgcaacaagcattcaggacttactttagaatccagctctgt-aattctcagct 587
Query: 304 gagaacatttcttgaaatgagagaac--attttttttttaaataagagtctttctaccac 361
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 586 gagaacatttcttgaaatgagagaactttttttttttttaaataagagtctttctaccac 527
Query: 362 aagtcagccccccacctcccactccagtgtgttgcttgctcatcaggctaagagtttcca 421
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aagtcagccccttagctcccactccagtgtgttgcttgctcatcaggctaagagtttcca 467
Query: 422 aatgaccagagctaagccattctttaaaaattaaacatattgtacatctatgggtaccta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aatgaccagagctaagccattctttaaaaattaaacatattgtacatctatgggtaccta 407
Query: 482 tgttatggtgcatgtgtgtggtggtcagttctctccttctaccatatggattctggggat 541
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 tgttatggtgcatgtgtgtggtggtcagttctctccttctaccatatgggttctggggat 347
Query: 542 ttgaacttggggtgtcaggctgagtagcaggcaccgttacttactgagccatctcaggaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgaacttggggtgtcaggctgagtagcaggcaccgttacttactgagccatctcaggaa 287
Query: 602 ccccagagataactcttctatcacattatttcatttgctttggagagctcgcca 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ccccagagataactcttctatcacattatttcatttgctttggagagctcgcca 233
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_h10.g1 MSMg01no325_h10.g1 CHROMAT_FILE:
MSMg01no325_h10.g1 PHD_FILE: MSMg01no325_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:58 2005
(573 letters)
>mm_chr15_102503081_102504053
Length = 973
Score = 1023 bits (529), Expect = 0.0
Identities = 562/573 (98%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 1 tttgtagctcttagtttcataccctaagaggcacaatctatagttcttaggagccgccgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tttgtagctcttagtttcataccctaagaggcacaatctatagttcttaggagctgccgc 260
Query: 61 caccaaatggtgttgcagctgttggttgcgacaatttagagatctcgtatatatatcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccaaatggtgttgcagctgttggttgcgacaatttagagatctcgtatatatatcgct 320
Query: 121 aacaaaatcccggaggaggatgaatcagagaaagggcctgtgaggagctaaccctggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaaaatcccggaggaggatgaatcagagaaagggcctgtgaggagctaaccctggctt 380
Query: 181 ctcctaaaagttactgcagagtctgataattccctggcccgtgtggtaggatttagttag 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ctcctaaaagttactgcagagtctgataattccctggcccgagtggtaggatttagttag 440
Query: 241 acaaacctgagttcccaaatcacgtgtgaccttggccaagttatttaacccttttaaagt 300
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||
Sbjct: 441 acaaacctgagttcccaaatcacatgtgaccttgggcaagttatttaacccttttaa-gt 499
Query: 301 cattttttcccctctccttttaaaattgagtataataacagcgcccaccctgcagcctat 360
||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 500 cattttt-cccctctccttttaaaattgggtataataacagcgcttaccctgcagcctat 558
Query: 361 attgagataataatgtacatgaagcttttagcagagggcttggtactcagtaaaagttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 attgagataataatgtacatgaagcttttagcagagggcttggtactcagtaaaagttca 618
Query: 421 ataatcgccataatcattatcgttagtattatagttacgatcactgcaatttaattctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ataatcgccataatcattatcgttagtattatagttacgatcactgcaatttaattctgt 678
Query: 481 catgctcccgtgagactgtttattgtgaagggtccttgcacggctatctcctgaaagaga 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 679 catgctcccgtgagactgtttattgtgaagggtccttgcacggttatctcctgaaagaga 738
Query: 541 ttcatatattacaaaactttttcaatcacataa 573
|||| ||||||||||||||||||||||||||||
Sbjct: 739 ttcaaatattacaaaactttttcaatcacataa 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
