Query= MSMg01no326_j02.b1 MSMg01no326_j02.b1 CHROMAT_FILE:
MSMg01no326_j02.b1 PHD_FILE: MSMg01no326_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:18 2005
(428 letters)
>mm_chr15_58801814_58802641
Length = 828
Score = 731 bits (378), Expect = 0.0
Identities = 411/422 (97%)
Strand = Plus / Plus
Query: 7 attctgtcttactctagaaagcgcaggtcaagtagaagccttcgctgctttctctctgtg 66
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctgtcttactgtagaaagcgcaggtcaagtagaagccttcgctgctttctctctgtg 266
Query: 67 acggggctcagaaaaaaaagaaatcgctcctgaacaagctcgacatatcgctttcacgtc 126
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 267 acggggctcagaaaaaaaagaaatcgctcctgaacaagctcggcatatcgctttcatgtc 326
Query: 127 cccttcgcagttagcattgctgtgtatttactgaactaattaaatgtaaactatcaattc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 cccttcgcagttagcattgctgtgtatttactgaactaattaaatgtaaactatcgattc 386
Query: 187 tttctccatgtgtagataacatatgaaaccatggctgagcacatgtggtgaacctcagaa 246
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttctccacgtgtagataacaaatgaaaccatggctgagcacatgtggtgaacctcagaa 446
Query: 247 gagggcaagcaacatggcagctcacaactgtaactcctcagtgcatacagcctttgttat 306
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 447 gagggcaagcaacatggcggctcacaactgtaactcctcagtgcatacagcctttgctat 506
Query: 307 tttacaacgttctttcgtcaaaatgctccacggaagctcgctgaggttctccaggaacgt 366
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 507 tttacaacgttctttcgtcaaaatgctccacggaagctcgctgaagttctccaggaacgt 566
Query: 367 ggctcctcgcacgagggaacgcgtgtcccctagagactctcatcaactaaacatccaaag 426
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 567 ggctcctcgcacgagggaacgcgtgtcccctagagactctcatcaactgagcatccaaag 626
Query: 427 tc 428
||
Sbjct: 627 tc 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_j02.g1 MSMg01no326_j02.g1 CHROMAT_FILE:
MSMg01no326_j02.g1 PHD_FILE: MSMg01no326_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:18 2005
(126 letters)
>mm_chr15_59004147_59004670
Length = 524
Score = 215 bits (111), Expect = 9e-61
Identities = 121/125 (96%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 1 ccatcaccgccatttttgttcctacttttcattgcatggactagtttactgggggggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccatcaccgccatttttgttcctacttttcattgcatggactagtttactgggggggggg 264
Query: 61 gggcggcacagtatatgcatggcaatcaaagacaatgtgccaaaattggttctctctctc 120
|| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 263 gg--ggcacagtatatgcatggcaatcagagacaatgtgccagaattggttctctctctc 206
Query: 121 taccg 125
|||||
Sbjct: 205 taccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 524
Length adjustment: 8
Effective length of query: 118
Effective length of database: 516
Effective search space: 60888
Effective search space used: 60888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
