Query= MSMg01no326_j06.b1 MSMg01no326_j06.b1 CHROMAT_FILE:
MSMg01no326_j06.b1 PHD_FILE: MSMg01no326_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:18 2005
(677 letters)
>mm_chr15_67992235_67993311
Length = 1077
Score = 1239 bits (641), Expect = 0.0
Identities = 665/673 (98%)
Strand = Plus / Minus
Query: 5 gaattccactctcagctggagccattcaggtcttggtggttcttgcttttgttcacaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gaattccactctcagctggagccattcaggtcttggtggttcttgcttttgttcacaggc 818
Query: 65 cactggcctaaggtgactcagctctgtctgctgtcctggtattcatccctatgtaggttg 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cactggcctgaggtgactcagctctgtctgctgtcctggtattcatccctatgtaggttg 758
Query: 125 ctactttacaggaggatgcagcgtcagggtcctccctccgaggggaaagtgtactttggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ctactttacaggaggatgcagcgtcagggtcctccctccgaggggaaagtgtactttggt 698
Query: 185 catactcatgttctatagttctgtctttgatcatggtgggcaccataacaaagcagactt 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 catattcatgttctatagttctgtctttgatcatggtgggcaccataacaaagcagactt 638
Query: 245 ttatttaaaatagttttggcgactcttctttagatcaaccataaaaaacccaagctttgt 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttatttaaaatagttttggtgactcttctttagatcaaccataaaaaacccaagctttgt 578
Query: 305 ttgaaaataccctactaaatcgcaataccgtgtgtgataattcaaacagaagggttttgg 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 577 ttgaaaataccctactaaatcgcaataccgtgtgtgataattgaaacagaagggttttgg 518
Query: 365 cagtgctggcgaatgaataaacacttcgctgttgaacatcaaccccaccccctcaggcag 424
||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 517 cagtgctggggaatgaatacacacttggctgttgaacatcaaccccaccccctcaggcag 458
Query: 425 aacggttttgaaggcatttggaaagctaatcaaacttcacgcacataccaaaaacgcacg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aacggttttgaaggcatttggaaagctaatcaaacttcacgcacataccaaaaacgcacg 398
Query: 485 ttctgtgactgcaatgacatgagaggtaggacagagtttctacccgagtacaccccatgc 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttctgtaactgcaatgacatgagaggtaggacagagtttctacccgagtacaccccatgc 338
Query: 545 tctgtcaccagtaagaaatgctgctggacagcattctggctcttagacacatttcagttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgtcaccagtaagaaatgctgctggacagcattctggctcttagacacatttcagttt 278
Query: 605 cacagataagatgccaaaagtatgtatctcagaaatgatgaaagaacatagtgtagatgt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cacagataagatgccaaaagtatgtatctcagaaatgatgaaagaacatagtgtagatgt 218
Query: 665 gagcatgagccca 677
|||||||||||||
Sbjct: 217 gagcatgagccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_j06.g1 MSMg01no326_j06.g1 CHROMAT_FILE:
MSMg01no326_j06.g1 PHD_FILE: MSMg01no326_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:18 2005
(673 letters)
>mm_chr15_67953097_67954169
Length = 1073
Score = 1218 bits (630), Expect = 0.0
Identities = 663/674 (98%), Gaps = 2/674 (0%)
Strand = Plus / Plus
Query: 1 tatactg-ccattatggggcagtccgtgggcaacagctacgaaagagaggggccaatcaa 59
||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatactgccca-catgggacagtccgtgggcaacagctacgaaagagaggggccaatcaa 259
Query: 60 agtaagaaatggtctacaaaccaaatccacactgagagccaagtccatccttcatgtggc 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 260 agtaagaaatggtctacaaaccaaatccacactgagaaccaagtccatccttcatgtggc 319
Query: 120 aaagcagataaattgccacatgagaattccaatgccctttagttcccatgcagagtcctt 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 aaagcagataaattgccgcatgagaattccaatgccctttagttcccatgcagtgtcctt 379
Query: 180 ggaagaatttctaataagaaaaaatggcaaacaggtatgccaggggacaaggggtgtaca 239
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 ggaagaagttctaataagaaaaaatggcaaacaggtatgccagggaacaaggggtgtaca 439
Query: 240 gaggaggccaaatgagagagcaatccccaagctacagagttttatcaaaatctcaattct 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaggaggtcaaatgagagagcaatccccaagctacagagttttatcaaaatctcaattct 499
Query: 300 tgacattggaaggcttgggggagggcatcaggttgctctgacagagtgagctcagcactg 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 tgacattggaaggcttgggggagggcatcaggttgctgtgacagagtgagctcagcactg 559
Query: 360 ggctgagcagatggctcccaggtgagcagttctggggctagaaagataacgattgccttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggctgagcagatggctcccaggtgagcagttctggggctagaaagataacgattgccttc 619
Query: 420 ccccggcttacttctgctccttaaaccctttccatcacatcatgaaatcccttgctgggg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccccggcttacttctgctccttaaaccctttccatcacatcatgaaatcccttgctgggg 679
Query: 480 tactccatcctaaactacattcactgaaccacacttggaccttcctagcaaatccaattc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tactccatcctaaactacattcactgaaccacacttggaccttcctagcaaatccaattc 739
Query: 540 aaggttgagaaggcatgatagtgccagtctgggaacactccaggggctgtggtaccaaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaggttgagaaggcatgatagtgccagtctgggaacactccaggggctgtggtaccaaga 799
Query: 600 aggcacacaaaccactgctaaggccctgctgcacatgaagtctggctgcatctccaatgc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aggcacacaaaccactgctaaggccctgctgcacatgaagtctggctgcatctccaatgc 859
Query: 660 ttcaggcctgaaga 673
||||||||||||||
Sbjct: 860 ttcaggcctgaaga 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
