Query= MSMg01no326_p19.b1 MSMg01no326_p19.b1 CHROMAT_FILE:
MSMg01no326_p19.b1 PHD_FILE: MSMg01no326_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:47 2005
(224 letters)
>mm_chr15_4211851_4212474
Length = 624
Score = 395 bits (204), Expect = e-114
Identities = 216/220 (98%)
Strand = Plus / Minus
Query: 5 gaattcattaataccacttggtgatctaggactgagtgaatcatctatctaaagagcgtt 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 330 gaattcattaacaccacttggtgatctaggactgagtgaatcatctatctaaagagcatt 271
Query: 65 tgcagaactcaaacctccagttcatagccttggatccaatctttcagaattgaaagccgt 124
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 tgcagaattcaaacctccagttcatagccttggagccaatctttcagaattgaaagccgt 211
Query: 125 ggtgtgtttatatatttataatatttacataaagtttctgagatcataaatagctggatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggtgtgtttatatatttataatatttacataaagtttctgagatcataaatagctggatt 151
Query: 185 gaagaaactttgaaagagtgtttagtagttattgtgtttt 224
||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gaagaaactttgaaagagtgtttagtagttattgtgtttt 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no326_p19.g1 MSMg01no326_p19.g1 CHROMAT_FILE:
MSMg01no326_p19.g1 PHD_FILE: MSMg01no326_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:47 2005
(654 letters)
>mm_chr15_4046422_4047475
Length = 1054
Score = 1226 bits (634), Expect = 0.0
Identities = 649/654 (99%)
Strand = Plus / Plus
Query: 1 atcttatttataacaaaggagcaaaatgacccttctagtgtttgaggtcactctcatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttatttataacaaaggagcaaaatgacccttctagtgtttgaggtcactctcatcca 260
Query: 61 gtctcagctatgataaaggaggaaatgtaagtgcccttgcaatggcagcccttacatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctcagctatgataaaggaggaaatgtaagtgcccttgcaatggcagcccttacatggt 320
Query: 121 gttattgacatgagagttcagagataggcaatttccaagcttttggacagtatgaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttattgacatgagagttcagagataggcaatttccaagcttttggacagtatgaaggaa 380
Query: 181 actcagatacgataaggatttcctacagagacttattctcctatattcttaaagggtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcagatacgataaggatttcctacagagacttattctcctatattcttaaagggtagt 440
Query: 241 ggcagaaaagaagccacccaacagaaagtgtgacattgggttaaaaatgaccaccaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcagaaaagaagccacccaacagaaagtgtgacattgggttaaaaatgaccaccaaatt 500
Query: 301 acagtgaccttggtggactgaagatatcctctgagtctcctgcccgccccctcattggcc 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 501 acagtgaccttggtggactgaagatatcctctgagtctcctgcttgggccctcattggcc 560
Query: 361 aaccccaagtggaaatgtgtcaggcttttgtggatggagaaagtgggagtggatatacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 aaccccaagtggaaatgtgtcaggcttttgtggatggagaaagtgggagtggatacacag 620
Query: 421 tactaggctggtgcactggagttttgattgttgaaagtgtgtaccattctgtactgtagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactaggctggtgcactggagttttgattgttgaaagtgtgtaccattctgtactgtagg 680
Query: 481 ccttattagcgtgagagggtcctctgcagatagggttgcctaagtctgtaccaggtcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccttattagcgtgagagggtcctctgcagatagggttgcctaagtctgtaccaggtcact 740
Query: 541 gagttcatgccgaggctgtgacctgaagacaagtagagtctctttgacttggggactcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagttcatgccgaggctgtgacctgaagacaagtagagtctctttgacttggggactcta 800
Query: 601 gcactgtattctcttctgctcatgtagtcacatgctttgccttttattatcagc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcactgtattctcttctgctcatgtagtcacatgctttgccttttattatcagc 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
