Query= MSMg01no327_e06.b1 MSMg01no327_e06.b1 CHROMAT_FILE:
MSMg01no327_e06.b1 PHD_FILE: MSMg01no327_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:08 2005
(292 letters)
>mm_chr15_55284436_55285131
Length = 696
Score = 453 bits (234), Expect = e-132
Identities = 271/292 (92%), Gaps = 16/292 (5%)
Strand = Plus / Minus
Query: 3 ggaattcaaagaggtgtccatagaacttttaattagtaaaccttcagttgtaaaccccta 62
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ggaattcaaagaggtgtcaatagaacttttaattagtaaactttcagttgtaaaccccta 442
Query: 63 cccccccccacaaacacacacacacacttttcatataggtatgtaatcctatctaacaag 122
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccccc----------cacacacacacttttcatataggtatgtaatcctatctaacaag 392
Query: 123 aaaaaaagttaagttttcatatgtaattatttttcattatacaatatgcagtaaagatgc 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 -aaaaaagttaagttttcatatgtaattatttttcattatacaatatgcagtaaagatgc 333
Query: 183 c-----aaaaaaaaaaacatggagagctccaattggccaggaagaccaacaatcctctcc 237
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caaaaaaaaaaaaaaaacatagagagctccaattggccaggaagaccaacaatcctctcc 273
Query: 238 ctccctctctgtctctgtctctctctctatctctctctttgtgtgtgtgcgc 289
||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 272 ctctctctctgtctctgtctctctctatatctctctctttgtgtgtgtgcgc 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 696
Length adjustment: 9
Effective length of query: 283
Effective length of database: 687
Effective search space: 194421
Effective search space used: 194421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_e06.g1 MSMg01no327_e06.g1 CHROMAT_FILE:
MSMg01no327_e06.g1 PHD_FILE: MSMg01no327_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:08 2005
(347 letters)
>mm_chr15_55114918_55115664
Length = 747
Score = 569 bits (294), Expect = e-166
Identities = 330/342 (96%)
Strand = Plus / Plus
Query: 1 ctcactgagaccactgctcattaggaggagggaaaagaccttgttgttcaaggacaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcactgagaccactgctcattaggaggagggaaaagaccttgttgttcaaggacaaaga 260
Query: 61 aagggacttgctgggggtaaagaaagcatacaggggattatgtagatttgatgcacttgc 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 aagggacttgctgggggtaaagaaaacatacaggggattatgtagatttgatgcacttgt 320
Query: 121 atcaaagttgctggaaaaagaagataaaaatgagatctgtccatagcaacaaagtcatgc 180
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 321 atcaaagttgctggaaaaagaagataaaaatgatatttgtccatagcaacaaagtcatgt 380
Query: 181 actcattgggaagaaagtaagttggggaagggaagagaaatctgaagatggggtccagcc 240
||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||
Sbjct: 381 actcattgggaagaaagtaagttgggggagggaagagaaatctaaagatgaggtccagct 440
Query: 241 gctgcactcagacaagtcaagcgatggctttgggtggacgccagcaagactcccaagagt 300
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 actgcactcagaaaagtcaagcgatggctttgggtggacgccagcaaaactcccaagagt 500
Query: 301 ctactcaaccaatgacactccacagacataagatggtttcct 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctactcaaccaatgacactccacagacataagatggtttcct 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
