Query= MSMg01no328_b07.b1 MSMg01no328_b07.b1 CHROMAT_FILE:
MSMg01no328_b07.b1 PHD_FILE: MSMg01no328_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:07 2005
(277 letters)
>mm_chr15_98953789_98954467
Length = 679
Score = 466 bits (241), Expect = e-136
Identities = 267/279 (95%), Gaps = 7/279 (2%)
Strand = Plus / Plus
Query: 1 aacaatccccccaggctgagattgcaagtgcaagctggcactcctggtttgggttttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaatccccccaggctgagattgcaagtgcaagctggcactcctggtttgggttttgtc 260
Query: 61 tcagatggggctgcagggattgactaatcctggtccttgtgtgtgtgtgtg--gcagcag 118
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tcaaatggggctgcagggattgactaatcctggtccttgtgtgtgtgtgtgtggcagcag 320
Query: 119 ttcactaacagaactatttcctcagctctgccatttgccctttcaatctgtaaaaccatg 178
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 321 ttcactaacagaactatttcctcagctctgctatttgccctttcaatctgtaaaaccacg 380
Query: 179 tttggagtgcattgggcgtgtactaattaaggttgtgtgctttggagttcattttcattt 238
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 381 tttggagtgcattgggcgtgtactaattaaggctgtgtgctttggagttcatttttattt 440
Query: 239 ttattgttttgaattatttattttatgtgtatgagtaca 277
||||||||||||||||||||| |||||||||||||
Sbjct: 441 ttattgttttgaattatttat-----gtgtatgagtaca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 679
Length adjustment: 9
Effective length of query: 268
Effective length of database: 670
Effective search space: 179560
Effective search space used: 179560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no328_b07.g1 MSMg01no328_b07.g1 CHROMAT_FILE:
MSMg01no328_b07.g1 PHD_FILE: MSMg01no328_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:07 2005
(285 letters)
>mm_chr15_99122856_99123540
Length = 685
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 1 cactcctgcctctgcctcccaagtgctgggattacagtatgagcaggcaactgtttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cactcctgcctctgcctcccaagtgctgggattacagtatgagcaggcaactgtttttaa 358
Query: 61 aggtcaaatgaatatagaaagcatttcaggacaaagagcagagccttgcttgcctcgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aggtcaaatgaatatagaaagcatttcaggacaaagagcagagccttgcttgcctcgttg 298
Query: 121 atcttctccctggagacagccatttttcacaactagtggattttctgttgctgttgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atcttctccctggagacagccatttttcacaactagtggattttctgttgctgttgtttt 238
Query: 181 ggtttctttggttttgttgttgttttgtttttggtttttggtttgtttgtttcttcagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggtttctttggttttgttgttgttttgtttttggtttttggtttgtttgtttcttcagtg 178
Query: 241 tatccctctgtcagcctcattgcttctcactgggtaaggaatcca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tatccctctgtcagcctcattgcttctcactgggtaaggaatcca 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
