Query= MSMg01no329_b03.b1 MSMg01no329_b03.b1 CHROMAT_FILE:
MSMg01no329_b03.b1 PHD_FILE: MSMg01no329_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:24 2005
(654 letters)
>mm_chr15_38922886_38923940
Length = 1055
Score = 1110 bits (574), Expect = 0.0
Identities = 622/640 (97%), Gaps = 6/640 (0%)
Strand = Plus / Minus
Query: 7 attcct---gaatactaaacaaaaagcagactctagatgtatctctaataaatacatacc 63
|||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 637 attcctgaagaat--taaacaaaaagcagactctggatgtatctctaatgaatacatacc 580
Query: 64 tattgttagcttccatttcccttccttcttgaagaagaggcctgactgatttcttacaga 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tattgttagcttccgtttcccttccttcttgaagaagaggcctgactgatttcttacaga 520
Query: 124 aacctatctactccctccactcagccttgcgagttaggggcaccagcctcacctgctctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacctatctactccctccactcagccttgcgagttaggggcaccagcctcacctgctctg 460
Query: 184 aagctgggtcctgatgggcagcaccaatctggatatacagctttgtttatagtcacaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aagctgggtcctgatgggcagcaccaatctggatatacagctttgtttatagtcacaaat 400
Query: 244 ggcatgaaaccaacacagataagccatccagagtagctgaaaataattttttccttagta 303
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 399 ggcatgaaaccaacacagataagccatccagagtagctgaaaatattttttttcttagta 340
Query: 304 tcctggcatagattctctcctggcttcactcatgaagattcatgtaactcagtcctcatg 363
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 339 tcctggcatagattctctccttgcttcactcatgaagattcatgtaactcagtccacatg 280
Query: 364 aaagccgatttagactcctaattggacaacgtaagtgtccaaaatggagtcagcctcaag 423
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 279 aaagccgatttagactcctaattggacaatgtaagtgtccaaaatggagtcagcctcaag 220
Query: 424 aatgtaacaaattagccgtatgtggtagcgcacacctttaatcctagcgcttgggaggca 483
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 219 aatgtaacaaattagccggatgtggtagcgcacacctttaatcctagcacttgggaggca 160
Query: 484 gaggcaggcggatctctgagtttgaggccagcctggtctacagagtgatttccaggacag 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaggcaagcggatctctgagtttgaggccagcctggtctacagagtgatttccaggacag 100
Query: 544 ccagggctaaaagagaaatcctgtcttgaaaaaaacaacaaaacaaaacaaagaatgtaa 603
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 99 ccagggctaaaagagaaatcctgtcttg-aaaaaccaacaaaacaaaacaaagaatgtaa 41
Query: 604 caaattaatgtaataaatgtaaataatatgtaaaatgtaa 643
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 caaattaatgtaataaatgtaaataatatgtaaaatgtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_b03.g1 MSMg01no329_b03.g1 CHROMAT_FILE:
MSMg01no329_b03.g1 PHD_FILE: MSMg01no329_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:24 2005
(622 letters)
>mm_chr15_38756431_38757452
Length = 1022
Score = 1143 bits (591), Expect = 0.0
Identities = 615/623 (98%), Gaps = 2/623 (0%)
Strand = Plus / Plus
Query: 1 cacagaacaggcaaaacaattcatttagtaattttcaagtggcagtggttgcttttactg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 cacagaacaggcaaaacaattcatttagtaattttcaagtggcagcggttgcttttactg 260
Query: 61 tagtagcataaagaatgtcctcggaaggactctgtatgttgtgagaggtttctgaagtgg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 tagtagcataaagaatgtcctcggaaggactctgtgtgttgtgagaggtttctgaagtgg 320
Query: 121 aagtgaggacagaaattgctgattcattatggagtgctccttaagctcaaatagattgtg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aagtgaggacagaaattgctgattcattatggagtgctccttaagctcgaatagattgtg 380
Query: 181 ctatgagcaccacaaaggcactccagcctaactcccaccacgagaatgctagagagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatgagcaccacaaaggcactccagcctaactcccaccacgagaatgctagagagcttg 440
Query: 241 ttaacacacatccttttagcaatgggattgactgggtttcctaacctttgccaatctgat 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ttaacacacatccttttagcaatgggattgacggggtttcctaacctttgccaatctgat 500
Query: 301 tggtaagaaatgatatgctagtttttttaaaaaatttcaaaactttatttttcagtaact 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 tggtaagaaatgatatgctagtttttt-aaaaaatttcaaaactttatttttcagtaact 559
Query: 361 gttagcgattcataaattccccattaagttacagaatgtaaagtgtcgcagtggatgttt 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 gttagcgattcataaattccccattaagttacagaatgtaaagtgttgcagtggatgttt 619
Query: 421 tccacagcccagtgaagcagtgtgaa-acacatggcaggtgtctgagatacacgctagag 479
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 tccacagcccagtgaagcagtgtgaagacacatggcaggtgtctgagatacacgctagag 679
Query: 480 gtctaaacttaaaacactccaactgatcaaagctttttcattttcatggacctcaatata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtctaaacttaaaacactccaactgatcaaagctttttcattttcatggacctcaatata 739
Query: 540 tatatttttagattcaataaagaaaaaataacatgtaatttctcatatctgtctcagaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tatatttttagattcaataaagaaaaaataacatgtaatttctcatatctgtctcagaga 799
Query: 600 acaatttattaacaactttagaa 622
|| ||||||||||||||||||||
Sbjct: 800 acgatttattaacaactttagaa 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
