Query= MSMg01no331_p23.b1 MSMg01no331_p23.b1 CHROMAT_FILE:
MSMg01no331_p23.b1 PHD_FILE: MSMg01no331_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:00 2005
(523 letters)
>mm_chr15_6667701_6668623
Length = 923
Score = 967 bits (500), Expect = 0.0
Identities = 515/520 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctgtgtacagttccagttactgctgacgaattaaatttaagctcatgttagct 63
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 204 ggaattcctgtgtacagttttagttactgctgacgaattaaatttaagcttatgttagct 263
Query: 64 ttgaaatggaggttactgtatatacttcctccccctttgtccttttcctttatttaatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgaaatggaggttactgtatatacttcctccccctttgtccttttcctttatttaatag 323
Query: 124 gagaatttagagttagctgttaattaggttccagccttgttctttccctgacaaaaggag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagaatttagagttagctgttaattaggttccagccttgttctttccctgacaaaaggag 383
Query: 184 aaaaattacttgaaaaaaggaaaagcgtttggatttttagaagaaaacaaaaagatgtta 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaattacttgaaaaaaggaaaagcttttggatttttagaagaaaacaaaaagatgtta 443
Query: 244 agagcctgggtttaaaacagttgattctgttattgtttcttttcctactttcatttttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agagcctgggtttaaaacagttgattctgttattgtttcttttcctactttcatttttta 503
Query: 304 ataattctgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataattctgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattat 563
Query: 364 tttgagataggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgagataggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaa 623
Query: 424 tacatatattgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tacatatattgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaag 683
Query: 484 gtatgttttatgtatggacttaatgtttatttagttttta 523
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 gtatgttttatgtatgaacttaatgtttatttagttttta 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_p23.g1 MSMg01no331_p23.g1 CHROMAT_FILE:
MSMg01no331_p23.g1 PHD_FILE: MSMg01no331_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:00 2005
(610 letters)
>mm_chr15_6828535_6829546
Length = 1012
Score = 835 bits (432), Expect = 0.0
Identities = 494/518 (95%), Gaps = 14/518 (2%)
Strand = Plus / Minus
Query: 1 catttctttctttcttttcatcaggaagaaggtggcaccttacggaggccatttgttccc 60
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 508 catttctttctttcttttcatcaagaagaaggtggtgccttacggaggccatttgttccc 449
Query: 61 cgggatcaggacttggaggggaagcggagggagaatgagagtcctccccagtctctctgg 120
|||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 448 cgggatcatgacttggaggggaagtggagggagaatgagagtcctccccaatctctctgg 389
Query: 121 cttcccaaaggtgagagaggttgtgcttagtcaccgtcccaccatgactgtggctttggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttcccaaaggtgagagaggttgtgcttagtcaccgtcccaccatgactgtggctttggc 329
Query: 181 atcaattgaatccactgacactaggttaaaacattcaaattacttctctttataagttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atcaattgaatccactgacactaggttaaaacattcaaattacttctctttataagttgg 269
Query: 241 ccatctcagatttttgtttcagttacaggaaactgactgacactaag-tttaaaa--aaa 297
|||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 268 ccatttcagatttttgtttcagttacaggaaactgactgaca-taagttttaaaaacaaa 210
Query: 298 acaaaacaaaaacaaacaaacaaacaaacaaataaaccaaactgttcctaggacaggaag 357
||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 209 acaaaacaaaaacaaacaaacaaacaa--aaa-aaaccaaactgttcctaggagaggaag 153
Query: 358 gagttagaca-ttacaaatgtgaagacacacacccctagtcacagcccaacagctctgtt 416
|||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 152 gagttaga-agttacaaatgtgaagacacacacctctagtcacagcccaacagctctgtt 94
Query: 417 aaattgacctaacatagagcaaaaacaaaggattgttttttaggtaaaataaggacactt 476
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 93 aaattgacctaacatagagc----acaaaggattg-tttttaggtaaaataaggacactt 39
Query: 477 tttaaaggcaccaagtgtgaggagctggcagctgactg 514
|||||||||||||||||||||||||||||||| |||||
Sbjct: 38 tttaaaggcaccaagtgtgaggagctggcagccgactg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1012
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1002
Effective search space: 601200
Effective search space used: 601200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
