Query= MSMg01no332_b10.b1 MSMg01no332_b10.b1 CHROMAT_FILE:
MSMg01no332_b10.b1 PHD_FILE: MSMg01no332_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:10 2005
(532 letters)
>mm_chr15_8761580_8762513
Length = 934
Score = 957 bits (495), Expect = 0.0
Identities = 524/535 (97%), Gaps = 4/535 (0%)
Strand = Plus / Minus
Query: 1 ttcttcttacttcatagacaaggagcttggatcttgaatacaataaaccctccaggatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttcttcttacttcatagacaaggagcttggatcttgaatacaataaaccctccaggatca 675
Query: 61 tatcagtatttacttagtggacctatgaatcctaaaaagtgggattcatttgtgtagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tatcagtatttacttagtggacctatgaatcctaaaaagtgggattcatttgtgtagcat 615
Query: 121 cagtgctctcctgacatgacatcttctgctagctaactagctaatgactgagcgcctgcc 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cagtgctctcctgagatgacatcttctgctagctaactagctaatgactgagcgcctgcc 555
Query: 181 tttcttttcttattttcactcagtgt---ttaagtactaactatggccagtgtcatcaca 237
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 554 tttcttttcttattttcactcagtgtttcttaagtactaactatggccagtgtcatcaca 495
Query: 238 gctcttcccatgactatacttaacagactgatagagtaaggcaaagatgatctatagatg 297
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 494 gctcttcccatgactatacttaacagactgataaag-aaggcaaagatgatctatagatg 436
Query: 298 ggtaataaatagttagcattaggtagtatgacaagggaagttgctaggtacaacagtgtt 357
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 435 ggtaataaatagttagcattaggtaatatgacaagggaagttgctaggtacaacagtgtt 376
Query: 358 ggaaggtctcagacattactggctcttggtatgtgtttggcacaatcatgaagtatttgc 417
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggaaggtctcagacattactgtctcttggtatgtgtttggcacaatcatgaagtatttgc 316
Query: 418 ctgatttactggagaagagagatgcggcagggagaatttaacagagcaggtaaccaaaaa 477
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 315 ctgatttactggagaagagagacgcatcagggagaatttaacagagcaggtaaccaaaaa 256
Query: 478 ttaactgaaatttgagttacagctttgcaaaaagtacttttttagttttgagtat 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttaactgaaatttgagttacagctttgcaaaaagtacttttttagttttgagtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 934
Length adjustment: 10
Effective length of query: 522
Effective length of database: 924
Effective search space: 482328
Effective search space used: 482328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_b10.g1 MSMg01no332_b10.g1 CHROMAT_FILE:
MSMg01no332_b10.g1 PHD_FILE: MSMg01no332_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:11 2005
(549 letters)
>mm_chr15_8584526_8585475
Length = 950
Score = 984 bits (509), Expect = 0.0
Identities = 533/545 (97%), Gaps = 8/545 (1%)
Strand = Plus / Plus
Query: 6 ttttttttttttttggtagggacataaacaagcacactccactctagatgagacttttga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttttttttttttttggtagggacataaacaagcacactccactctagatgagacttttga 265
Query: 66 atgatttgtcaagagacatctctatacaaaaaagagtatgttgtttttgtcatcctaaga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgatttgtcaagagacatctctatacaaaaaagagtatgttgtttttgtcatcctaaga 325
Query: 126 acgcctggttaaaatagtaaaaacaaaacaaataaaaaaacc-aaaaaaaaaaatctttt 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 acgcctggttaaaatagtaaaaacaaaacaaataaaaaaaccaaaaaaaaaaaatctttt 385
Query: 185 tcagaaatgagaccatccacccagcgtatggatctgtcccagagatgtggttggttggac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcagaaatgagaccatccacccagcgtatggatctgtcccagagatgtggttggttggac 445
Query: 245 tgggagatgaggaggaagtggtgttatgacgttttttctttgggggctgattagggactg 304
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 446 tgggagatgaggaggaagtggtgttatgacgtcgtttctttgggggctgattagggactg 505
Query: 305 aagaggaagtgtttaggctaacagaaaaagggttgagatatagctctccattttagtctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagaggaagtgtttaggctaacagaaaaagggttgagatatagctctccattttagtctt 565
Query: 365 taaagaaaaccaacttttcctgatctttcaaagaatcctcccttttgtaatgttggccat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taaagaaaaccaacttttcctgatctttcaaagaatcctcccttttgtaatgttggccat 625
Query: 425 actctattctttctccactctttagggttccacagtaagacttgagcacacttgctagtc 484
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 626 actctattctttctccactctttagtgttccacactaagacttgagcacacttgctagtc 685
Query: 485 ttctctttatttcctagacatctaattgtcagttgaagagactgtcttcccttggatttg 544
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 686 ttctctttatttcctagacatctaattg-------aagagactgtcttcccttggatttg 738
Query: 545 ggaag 549
|||||
Sbjct: 739 ggaag 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
