Query= MSMg01no332_i14.b1 MSMg01no332_i14.b1 CHROMAT_FILE:
MSMg01no332_i14.b1 PHD_FILE: MSMg01no332_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:05 2005
(447 letters)
>mm_chr15_99018402_99019248
Length = 847
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%)
Strand = Plus / Plus
Query: 1 catgaacaaatgaaatctacacagccattgtccagggctaaggttcagagaaatgggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgaacaaatgaaatctacacagccattgtccagggctaaggttcagagaaatgggaac 260
Query: 61 gacttttttacacatagctgctctcgggcttctgagatgtctccatctagacctgctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttttttacacatagctgctctcgggcttctgagatgtctccatctagacctgctgta 320
Query: 121 ggcagtcccttacttatttctgatggtgggtctcttggaagggtgtgtcacctgcttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagtcccttacttatttctgatggtgggtctcttggaagggtgtgtcacctgcttctc 380
Query: 181 cgggtcccaggcaccacctatgtcatggtattctgtccccagcaactgaggcttgtgaat 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggtcccaggcaccacctatgtcatggtattctgtccccagcaactgaggcttgtgaat 440
Query: 241 acttagtgtgtgcaccagtgagtatgcatgcttaggccagagcacagcattgtatgtctt 300
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 441 acttagtgtgtgcaccagtgagtatgcatgcggaggccagagcacagcattgtgtgtctt 500
Query: 301 cctctgtcaatgaaacgttgccatagggcagatccctcactgttccgcaggcttgccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctctgtcaatgaaacgttgccatagggcagatccctcactgttccgcaggcttgccttc 560
Query: 361 cttctaggtcgttggccagctagctctcagactccaccttctagtggattcaaattcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttctaggtcgttggccagctagctctcagactccaccttctagtggattcaaattcttg 620
Query: 421 tgaggatccaaactcaggtcccagtgt 447
|||||||||||||||||||||||||||
Sbjct: 621 tgaggatccaaactcaggtcccagtgt 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_i14.g1 MSMg01no332_i14.g1 CHROMAT_FILE:
MSMg01no332_i14.g1 PHD_FILE: MSMg01no332_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:05 2005
(595 letters)
>mm_chr15_99187765_99188759
Length = 995
Score = 1089 bits (563), Expect = 0.0
Identities = 586/599 (97%), Gaps = 10/599 (1%)
Strand = Plus / Minus
Query: 1 ccagaggagaggaggcgctgcagaccgagcaggatgggacgaggttaaaaagggagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ccagaggagaggaggcgctgcagaccgagcaggatgggacgaggttaaaaagggagaatg 658
Query: 61 agccggctgttgggaagctgccgtttggagtagaggagcctggttacagagaagtgagct 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 657 agccggctgttgggaagctgccgtttggaatagaggagcctggttacagagaagtgagct 598
Query: 121 tggctcaggatggaccttacatccacagggagttctgtctgaagattgactgatgctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tggctcaggatggaccttacatccacagggagttctgtctgaagattgactgatgctagg 538
Query: 181 aaaggctttgaggaggccctgctg-----ttttttctttcattagggaatagagattagc 235
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 537 aaaggctttgaggaggccctgctgcccaa-----tctttcattagggaatagagattagc 483
Query: 236 gattagttggtaagtggtccctgaccactcatgagtttgctcattgaaagttaaatggtt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gattagttggtaagtggtccctgaccactcatgagtttgctcattgaaagttaaatggtt 423
Query: 296 gaaatatgtgaaaaataaacgtttaatcctcagaggttagagaagcagaatagtttgagt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaaatatgtgaaaaataaacgtttaatcctcagaggttagagaagcagaatagtttgagt 363
Query: 356 aaaactggattggaaatggtcccacccgttacacttgaaccgtatgtagatgcttcaact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaactggattggaaatggtcccacccgttacacttgaaccgtatgtagatgcttcaact 303
Query: 416 tattgtccaaactttaaacttgttttcttttcctaactctttcttgtctttaaaggtgga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tattgtccaaactttaaacttgttttcttttcctaactctttcttgtctttaaaggtgga 243
Query: 476 agggcatctcgtcctaagtaatttgtgttgtgaacagtgcttgggttggggagctggctc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agggcatctcgtcctaagtaatttgtgttgtgaacagtgcttgggttggggagctggctc 183
Query: 536 agttggtgagatgcttagggcctgagtttgatctctagcacccacctagaaagctggcc 594
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 182 agttggtgagatgcttagggcctgagttcgatctctagcacccacgtagaaagctggcc 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
