Query= MSMg01no333_f05.b1 MSMg01no333_f05.b1 CHROMAT_FILE:
MSMg01no333_f05.b1 PHD_FILE: MSMg01no333_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:28 2005
(342 letters)
>mm_chr15_67143566_67144305
Length = 740
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 5 gaattccagctgatttccctaggggtgtttaggaatatgctgtacacataaaaagcaatg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagctgatttaactaggggtgtttaggaatatgctgtacacataaaaagcaatg 264
Query: 65 tattcaaaggaatacccttataccaaagtctggatttataagacacaaatgagtaatttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattcaaaggaatacccttataccaaagtctggatttataagacacaaatgagtaatttt 324
Query: 125 tgagccatcataaaggttttcttcccttattttatcaaagtattcttcatggagttcttt 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgagccatcataaaggttttctttccttattttatcaaagtattcttcatggagttcttt 384
Query: 185 caaggagaaatcttggtctcccatgatgcctttgaaatgcaatttattgcacatatgtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaggagaaatcttggtctcccatgatgcctttgaaatgcaatttattgcacatatgtta 444
Query: 245 ttagtgttcctgtgcttagtataaagtaggcactggtggcactatgccagtgtgagatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttagtgttcctgtgcttagtataaagtaggcactggtggcactatgccagtgtgagatgt 504
Query: 305 cattagnttggtccagttggctttcatagtgatttt 340
|||||| |||||||||||| ||||||||||||||||
Sbjct: 505 cattag-ttggtccagttg-ctttcatagtgatttt 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 740
Length adjustment: 9
Effective length of query: 333
Effective length of database: 731
Effective search space: 243423
Effective search space used: 243423
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_f05.g1 MSMg01no333_f05.g1 CHROMAT_FILE:
MSMg01no333_f05.g1 PHD_FILE: MSMg01no333_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:29 2005
(342 letters)
>mm_chr15_67233115_67233853
Length = 739
Score = 623 bits (322), Expect = 0.0
Identities = 336/342 (98%), Gaps = 3/342 (0%)
Strand = Plus / Minus
Query: 1 tgggacaagtaggtaaatgaaaatgatgacatcacagctgcagatatggttgaagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgggacaagtaggtaaatgaaaatgatgacatcacagctgcagatatggttgaagagaag 285
Query: 61 gctttcactgtaaatatggggaagaaaacaacaagagtcatcttgagttcagatggaaaa 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 284 gctttcactgtaaatatggggaagaa---aacaagagtcatcttgagttcagatggaaaa 228
Query: 121 tgaccagcagaatagactagaacatgagaagaggaggtggagaacaagagaggaagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgaccagcagaatagactagaacatgagaagaggaggtggagaacaagagaggaagagaa 168
Query: 181 gagagagggagcaaaaaagaggactgggggaaggagaaggaccaaagaatggggaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gagagagggagcaaaaaagaggactgggggaaggagaaggaccaaagaatggggaccaag 108
Query: 241 agatcttgtgtttaaaatggcaggtttttatagcaaagaagcagtggtaggcatggaaag 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 agatcttgtggctaaaatggcaggtttttatagcaaagaagcagtggtaggcatggaaag 48
Query: 301 catggtaactggagaggcttagaggagggcacggagtgagat 342
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 47 catgggaactggagaggcttagaggagggcacggagtgagat 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 739
Length adjustment: 9
Effective length of query: 333
Effective length of database: 730
Effective search space: 243090
Effective search space used: 243090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
