Query= MSMg01no334_m13.b1 MSMg01no334_m13.b1 CHROMAT_FILE:
MSMg01no334_m13.b1 PHD_FILE: MSMg01no334_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:19 2005
(480 letters)
>mm_chr15_61971933_61972812
Length = 880
Score = 864 bits (447), Expect = 0.0
Identities = 474/487 (97%), Gaps = 7/487 (1%)
Strand = Plus / Plus
Query: 1 tatttcttgttgtaaaggagtaaatgaagtttcaaagagacaaaatgccctgtctccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tatttcttgttgtaaaggagtaaatgaagtttcaaagagacaaaatgccttgtctccagt 260
Query: 61 caatatagccgggagctatcagaatcatacacaagtccatcgtctggcctatgtagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatatagccgggagctatcagaatcatacacaagtccatcgtctggcctatgtagaaca 320
Query: 121 tacaaggtgaagcaatgatggcctagtgacacagagcctccggccgtgtgacctgggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaggtgaagcaatgatggcctagtgacacagagcctccggccgtgtgacctgggagg 380
Query: 181 tactgtatcttgctaagcctcagtttcttacctggcaagtgtgatgatcacaatacttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactgtatcttgctaagcctcagtttcttacctggcaagtgtgatgatcacaatacttac 440
Query: 241 ttcctaggattattgagaacaaccatcacagccaggtccttcacatggaggagggagtga 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctaggattaatgagaacaaccatcacagccaggtccttcacatggaggagggagtga 500
Query: 301 ccaaccagcatgtgtgcttacaatgtcctagtttggataagcttgacccagagctcaact 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaaccagcatgtgtgcttacaatgccctagtttggataagcttgacccagagctcaact 560
Query: 361 cacccgccatgagatgtttctgaacagtgttgc-------catggccacgaggacatatt 413
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 caccagccatgagatgtttctgaacagtgttgctgggtgccatggccacgaggacatatt 620
Query: 414 gtgaaatgtgggcaagtggcttttcagggtggtgggtgctgagtgaagagtcaagacaag 473
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgaaatgcgggcaagtggctcttcagggtggtgggtgctgagtgaagagtcaagacaag 680
Query: 474 acaagaa 480
|||||||
Sbjct: 681 acaagaa 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_m13.g1 MSMg01no334_m13.g1 CHROMAT_FILE:
MSMg01no334_m13.g1 PHD_FILE: MSMg01no334_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:19 2005
(336 letters)
>mm_chr15_62157605_62158340
Length = 736
Score = 627 bits (324), Expect = 0.0
Identities = 333/336 (99%)
Strand = Plus / Minus
Query: 1 aaagagctgagttcaaatccccagaacccaagtaaaaagctgagtgtttgaacgtgtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaagagctgagttcaaatccccagaacccaagtaaaaagctgagtgtttgaacgtgtata 477
Query: 61 tgtaatctcagtgctactatgacaagataggcaatggaaatccaagaaagtcaagactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgtaatctcagtgctactatgacaagataggcaatggaaatccaagaaagtcaagactct 417
Query: 121 catgggccagtgaggctgccatacttagcccaaagggaaattaagtaagatgttacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 catgggccagtgaggctgccatacttagcccaaagggaaattaagtaagatgttacaagg 357
Query: 181 ttgtcctccgacttctacatgtgcattacagcaagtgtgcaatagacacacccatgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgtcctccgacttctacatgtgcattacagcaagtgtgcaatagacacacccatgcctc 297
Query: 241 atacaaagaatgatggaaagaaggagaaggaaggaagtggggaatgaggaagagggagag 300
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 296 atacaaagaaagatggaaagaaggagaagggaggaagtggggaatgaggaagagggaggg 237
Query: 301 ggaggagaagaaaatgaaactcaaagaatgtattaa 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggaggagaagaaaatgaaactcaaagaatgtattaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
